RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 PDCD10Q9BUL8 212 aa8.86□□□□□ -0.99
CCDC40-208ENST00000572270 NOP10Q9NPE3 64 aaKnown RBP8.86□□□□□ -0.99
CCDC40-208ENST00000572270 A8MTW9 85 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 INS-IGF2F8WCM5 200 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 ISLRO14498 428 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 SOCS3O14543 225 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 C1QBP02746 253 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 RAB3BP20337 219 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 AMTNQ6UX39 209 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 GPR141Q7Z602 305 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 BAP18Q8IXM2 172 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 C8orf59Q8N0T1 100 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-208ENST00000572270 TMEM256Q8N2U0 113 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 ENY2Q9NPA8 101 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 ACOT13Q9NPJ3 140 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 FKBP14Q9NWM8 211 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 LRP2P98164 4655 aa8.85□□□□□ -0.99
CCDC40-208ENST00000572270 GPR31O00270 319 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-208ENST00000572270 FCER2P06734 321 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 HOXA5P20719 270 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 PSMB9P28065 219 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 S100GP29377 79 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 CBX5P45973 191 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 HSPA13P48723 471 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 RND2P52198 227 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 TAS2R60P59551 318 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 SAMD13Q5VXD3 122 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 LAIR2Q6ISS4 152 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 DHRSXQ8N5I4 330 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 OR5AP2Q8NGF4 316 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 MRGPRFQ96AM1 343 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 FAM212BQ9NTI7 297 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-208ENST00000572270 EHFQ9NZC4 300 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 MSRB1Q9NZV6 116 aa8.84□□□□□ -0.99
CCDC40-208ENST00000572270 A0A096LPF7 62 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 TRAV1-2A0A0B4J238 106 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 ATP5HO75947 161 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 DUSP14O95147 198 aaKnown RBP8.83□□□□□ -1
CCDC40-208ENST00000572270 TOMM40O96008 361 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 RD3LP0DJH9 198 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 OR51G1Q8NGK1 321 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 ZNF2Q9BSG1 426 aaPredicted RBP8.83□□□□□ -1
CCDC40-208ENST00000572270 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
CCDC40-208ENST00000572270 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 A0A0B4J293 547 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 PTGES3LE9PB15 166 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 PSCAO43653 123 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 SLC25A4P12235 298 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
CCDC40-208ENST00000572270 PRSS54Q6PEW0 395 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 TMED4Q7Z7H5 227 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 C10orf67Q8IYJ2 551 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
CCDC40-208ENST00000572270 C16orf92Q96LL3 132 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 RRP15Q9Y3B9 282 aaKnown RBP8.82□□□□□ -1
CCDC40-208ENST00000572270 LY96Q9Y6Y9 160 aa8.82□□□□□ -1
CCDC40-208ENST00000572270 GAGE12BA1L429 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 ZNF98A6NK75 572 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 GAGE7O76087 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 IGKV1-39P01597 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 RLN2P04090 185 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 IGKV1D-39P04432 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 GAGE12FP0CL80 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 GAGE12GP0CL81 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 GAGE12IP0CL82 117 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 ZNF182P17025 639 aaPredicted RBP8.81□□□□□ -1
CCDC40-208ENST00000572270 MEOX2P50222 304 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 SUPT4H1P63272 117 aaKnown RBP8.81□□□□□ -1
CCDC40-208ENST00000572270 MLLT11Q13015 90 aaPredicted RBP8.81□□□□□ -1
CCDC40-208ENST00000572270 PHLDA2Q53GA4 152 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 IDNKQ5T6J7 187 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 C20orf173Q96LM9 149 aa8.81□□□□□ -1
CCDC40-208ENST00000572270 BOLA2-SMG1P6H3BVE0 249 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 RS1O15537 224 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 GNAO1P09471 354 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 PSG1P11464 419 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 UCP1P25874 307 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 ETV6P41212 452 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 ASIPP42127 132 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 IZUMO4Q1ZYL8 232 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 OR8G2PQ6IF36 304 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 SLC24A4Q8NFF2 622 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
CCDC40-208ENST00000572270 IFT46Q9NQC8 304 aa8.8□□□□□ -1
CCDC40-208ENST00000572270 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 TRAV18A0A075B6X5 111 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 K7EP13 123 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 ELK1P19419 428 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 ETFRF1Q6IPR1 90 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 DHRS11Q6UWP2 260 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 TBC1D26Q86UD7 250 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 Q8N814 137 aa8.79□□□□□ -1
CCDC40-208ENST00000572270 PPP1R14BQ96C90 147 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms