RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SCPEP1Q9HB40 452 aa13.97□□□□□ -0.17
CCDC40-206ENST00000572083 F6UB75 175 aa13.96□□□□□ -0.17
CCDC40-206ENST00000572083 PSG1P11464 419 aa13.96□□□□□ -0.17
CCDC40-206ENST00000572083 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.17
CCDC40-206ENST00000572083 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.17
CCDC40-206ENST00000572083 PBDC1Q9BVG4 233 aa13.96□□□□□ -0.17
CCDC40-206ENST00000572083 ID1P41134 155 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 PSMB3P49720 205 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 PSG9Q00887 426 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 RNASE12Q5GAN4 147 aaKnown RBP13.95□□□□□ -0.18
CCDC40-206ENST00000572083 FAM78BQ5VT40 261 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 SLC24A4Q8NFF2 622 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 RNF125Q96EQ8 232 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 CLUHP3Q96NS8 147 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 KLK11Q9UBX7 282 aa13.95□□□□□ -0.18
CCDC40-206ENST00000572083 NUDT3O95989 172 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 UCP1P25874 307 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 LSM3P62310 102 aaKnown RBP13.94□□□□□ -0.18
CCDC40-206ENST00000572083 LHFPL1Q86WI0 220 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 GPR146Q96CH1 333 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 MAGT1Q9H0U3 335 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
CCDC40-206ENST00000572083 SOCS3O14543 225 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 PRM2P04554 102 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 AARDQ4LEZ3 155 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 OR52E5Q8NH55 327 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 TMEM208Q9BTX3 173 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-206ENST00000572083 COMMD3Q9UBI1 195 aa13.93□□□□□ -0.18
CCDC40-206ENST00000572083 SMIM31A0A1B0GVY4 71 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 CEBPZOSA8MTT3 80 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 ALDH3B2P48448 385 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 PAX9P55771 341 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 RNASE10Q5GAN6 216 aaKnown RBP13.92□□□□□ -0.18
CCDC40-206ENST00000572083 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 EBLN2Q6P2I7 272 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 CCDC71LQ8N9Z2 235 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 CACNG5Q9UF02 275 aa13.92□□□□□ -0.18
CCDC40-206ENST00000572083 A0A0J9YX75 114 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 DEFB130BP0DP73 79 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 DEFB130AP0DP74 79 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 NUP62P37198 522 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-206ENST00000572083 SPATA31B1PQ5VZV4 182 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 LHFPL5Q8TAF8 219 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 LINC00588Q9Y4M8 146 aa13.91□□□□□ -0.18
CCDC40-206ENST00000572083 F5H768 121 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 CD3DP04234 171 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 KRTAP10-2P60368 255 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 FAM219AQ8IW50 185 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 ARRDC1Q8N5I2 433 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 OR13C8Q8NGS7 320 aa13.9□□□□□ -0.18
CCDC40-206ENST00000572083 DMBT1Q9UGM3 2413 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-206ENST00000572083 LYRM9A8MSI8 78 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 ZNF705GA8MUZ8 300 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-206ENST00000572083 APOA1P02647 267 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 OR5AC1P0C628 307 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 ELK1P19419 428 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 CCL18P55774 89 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
CCDC40-206ENST00000572083 MEF2DQ14814 521 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 OR8G2PQ6IF36 304 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 OR4D10Q8NGI6 311 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 IGF2BP2-AS1Q96M15 143 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 PFDN2Q9UHV9 154 aa13.89□□□□□ -0.19
CCDC40-206ENST00000572083 ISLRO14498 428 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 CDS2O95674 445 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 LYZP61626 148 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 ZNF90Q03938 601 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 ZFAND1Q8TCF1 268 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 C20orf173Q96LM9 149 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 Q9H521 79 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 DOK5Q9P104 306 aa13.88□□□□□ -0.19
CCDC40-206ENST00000572083 FAT1Q14517 4588 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 B3GALNT1O75752 331 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 FCN2Q15485 313 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 SCGB2B2Q4G0G5 96 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 AMTNQ6UX39 209 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 RBPMSQ93062 196 aaKnown RBP13.87□□□□□ -0.19
CCDC40-206ENST00000572083 KRTAP1-5Q9BYS1 174 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
CCDC40-206ENST00000572083 ZFP92A6NM28 416 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 M0R2Z0 102 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 HPGDSO60760 199 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 KLF9Q13886 244 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-206ENST00000572083 SSX7Q7RTT5 188 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 SELENOHQ8IZQ5 122 aaKnown RBP13.86□□□□□ -0.19
CCDC40-206ENST00000572083 TERB2Q8NHR7 220 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 GLYATL2Q8WU03 294 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 RNF141Q8WVD5 230 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 PPP1R14BQ96C90 147 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 C16orf92Q96LL3 132 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 ABHD1Q96SE0 405 aa13.86□□□□□ -0.19
CCDC40-206ENST00000572083 IGKV1D-37A0A075B6S9 117 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 CLINT1Q14677 625 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 SPINK13Q1W4C9 94 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 C1orf194Q5T5A4 169 aa13.85□□□□□ -0.19
CCDC40-206ENST00000572083 TMEM268Q5VZI3 342 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms