RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 CEACAM3P40198 252 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 OR4F17Q8NGA8 305 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 PERPQ96FX8 193 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 ELOA3CA0A087WX78 387 aaPredicted RBP13.1□□□□□ -0.31
RAB40B-206ENST00000571995 NAGKQ9UJ70 344 aa13.1□□□□□ -0.31
RAB40B-206ENST00000571995 MEF2CQ06413 473 aaPredicted RBP13.09□□□□□ -0.31
RAB40B-206ENST00000571995 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
RAB40B-206ENST00000571995 NBL1P41271 181 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 UNQ5815/PRO19632Q6UWF5 114 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 ATG101Q9BSB4 218 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 DPM3Q9P2X0 92 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 IGHV1-3A0A0C4DH29 117 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 SHISA9B4DS77 424 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 NDUFS6O75380 124 aaKnown RBP13.09□□□□□ -0.31
RAB40B-206ENST00000571995 SERF1AO75920 110 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 TXN2Q99757 166 aa13.09□□□□□ -0.31
RAB40B-206ENST00000571995 ISLRO14498 428 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 TMEM177Q53S58 311 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 ETFRF1Q6IPR1 90 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 LOC389332A0A1B0GUA5 103 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 IFITM10A6NMD0 228 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 P01737 135 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 OR52E5Q8NH55 327 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 GGTLC3B5MD39 225 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 F2Z2F3 143 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 M0QZ24 198 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
RAB40B-206ENST00000571995 A0A1B0GV90 55 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
RAB40B-206ENST00000571995 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 SRP14P37108 136 aaKnown RBP13.07□□□□□ -0.32
RAB40B-206ENST00000571995 NHLH1Q02575 133 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 M0R3E3 92 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 CSN1S1P47710 185 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 TPPP2P59282 170 aa13.07□□□□□ -0.32
RAB40B-206ENST00000571995 C22orf46C9J442 243 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 LGALS7P47929 136 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 NUP37Q8NFH4 326 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 CHODLQ9H9P2 273 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 ZNF586Q9NXT0 402 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 CORTO00230 105 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 P0C879 139 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 PSG1P11464 419 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 GPR183P32249 361 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 GATA4P43694 442 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 TFPI2P48307 235 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 PMCHL1Q16048 86 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 PRRC2AP48634 2157 aaKnown RBP13.06□□□□□ -0.32
RAB40B-206ENST00000571995 CFHR2P36980 270 aa13.06□□□□□ -0.32
RAB40B-206ENST00000571995 VENTXO95231 258 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 ARL2-SNX15V9GYD0 113 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 ANKRD17O75179 2603 aaKnown RBP13.05□□□□□ -0.32
RAB40B-206ENST00000571995 NUPR1O60356 82 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 DDTP30046 118 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 UNQ6494/PRO21346Q6UXR6 183 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 ST6GALNAC3Q8NDV1 305 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 FAM168AQ92567 244 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 K7EN84 100 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 APCSP02743 223 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 ORM1P02763 201 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 UCNP55089 124 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 ATP5J2P56134 94 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 DDB2Q92466 427 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 BET1LQ9NYM9 111 aa13.05□□□□□ -0.32
RAB40B-206ENST00000571995 K7EQM0 130 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 RNF224P0DH78 156 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 RPL15P61313 204 aaKnown RBP13.04□□□□□ -0.32
RAB40B-206ENST00000571995 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 MCRIP2Q9BUT9 160 aaKnown RBP13.04□□□□□ -0.32
RAB40B-206ENST00000571995 BPESC1Q9GZL8 116 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 PEX7O00628 323 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 CA7P43166 264 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 IL36BQ9NZH7 164 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 MSRB2Q9Y3D2 182 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
RAB40B-206ENST00000571995 TDGF1P3P51864 188 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 NRGNQ92686 78 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 SIGLEC9Q9Y336 463 aa13.04□□□□□ -0.32
RAB40B-206ENST00000571995 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 HTN1P15515 57 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 TET2Q6N021 2002 aaPredicted RBP13.03□□□□□ -0.32
RAB40B-206ENST00000571995 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 VAMP8Q9BV40 100 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 TMEM155Q4W5P6 130 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 FAM169BQ8N8A8 192 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 WFDC12Q8WWY7 111 aa13.03□□□□□ -0.32
RAB40B-206ENST00000571995 NOL4LQ96MY1 436 aaPredicted RBP13.03□□□□□ -0.32
RAB40B-206ENST00000571995 EIF4EBP1Q13541 118 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms