RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZNF627Q7L945 461 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 MDP1Q86V88 176 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 SLC25A42Q86VD7 318 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF695Q8IW36 515 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF101Q8IZC7 436 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CNEP1R1Q8N9A8 125 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 NUP35Q8NFH5 326 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 OR4S1Q8NGB4 309 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 OR1J1Q8NGS3 322 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TMEM230Q96A57 120 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 GINS4Q9BRT9 223 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 SPANXDQ9BXN6 97 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 NMES1Q9C002 83 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 FXYD6Q9H0Q3 95 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ATG5Q9H1Y0 275 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TUBA4BQ9H853 241 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ESM1Q9NQ30 184 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 TMEM100Q9NV29 134 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 EHFQ9NZC4 300 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 KCNIP1Q9NZI2 227 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 KLK11Q9UBX7 282 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 ZNF629Q9UEG4 869 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 PLA2G2DQ9UNK4 145 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 YTHDF2Q9Y5A9 579 aaKnown RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 FAM215AQ9Y5M1 114 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 SOX21Q9Y651 276 aaPredicted RBP2.84□□□□□ -1.95
SMG6-208ENST00000570874 GVINP1Q7Z2Y8 2422 aa2.84□□□□□ -1.95
SMG6-208ENST00000570874 MGAQ8IWI9 3026 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF292O60281 2723 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 LOC102724200A0A096LPH7 203 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 TRAV26-2A0A0B4J265 109 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 IGKV1-12A0A0C4DH73 117 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 IGHV3-64DA0A0J9YX35 117 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 GAGE12BA1L429 117 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 C5orf49A4QMS7 147 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TMEM235A6NFC5 223 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 RBFOX3A6NFN3 312 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 MSGN1A6NI15 193 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF850A8MQ14 1090 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TMEM14DPA8MWL7 114 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF736B4DX44 427 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 H0YIZ8 118 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 K7ENP7 123 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 MPPED1O15442 326 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 SOCS1O15524 211 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TNFSF13O75888 250 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 DUS4LO95620 317 aaKnown RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 CGAP01215 116 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 IGKV1D-12P01611 117 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 IGHV4-31P0DP07 118 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 FGF6P10767 208 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF93P35789 620 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 MEF2BQ02080 365 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 PSG7Q13046 419 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 SRSF9Q13242 221 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF266Q14584 549 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 DAZAP2Q15038 168 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 KISS1Q15726 138 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ECSCRQ19T08 205 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 MSMPQ1L6U9 139 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 BEAN1Q3B7T3 259 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TMEM30BQ3MIR4 351 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF260Q3ZCT1 412 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 FAM120AOSQ5T036 256 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF324BQ6AW86 544 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 ALKAL2Q6UX46 152 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 SCGB1D4Q6XE38 83 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TCF23Q7RTU1 214 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 C11orf53Q8IXP5 236 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 FBXL14Q8N1E6 418 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF664Q8N3J9 261 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 FER1L6-AS1Q8NA97 138 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 OR51T1Q8NGJ9 327 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 OR4C16Q8NGL9 310 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 SPTSSAQ969W0 71 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 MRPS24Q96EL2 167 aaKnown RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 HSD17B10Q99714 261 aaKnown RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 HDHD3Q9BSH5 251 aaPredicted RBP2.83□□□□□ -1.96
SMG6-208ENST00000570874 TM2D2Q9BX73 214 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 PRSS22Q9GZN4 317 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 TMEM133Q9H2Q1 129 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 RNF7Q9UBF6 113 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZNF257Q9Y2Q1 563 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 PLCE1Q9P212 2302 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 CFAP47Q6ZTR5 3102 aa2.83□□□□□ -1.96
SMG6-208ENST00000570874 ZFHX2Q9C0A1 2572 aaPredicted RBP2.82□□□□□ -1.96
SMG6-208ENST00000570874 IGKV1D-8A0A087WSZ0 117 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 A0A1B0GW64 132 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 SNURFLB1AK76 121 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 VWC2LB2RUY7 222 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 SHISA9B4DS77 424 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 LINC01619G3V211 115 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 J3QT63 122 aa2.82□□□□□ -1.96
SMG6-208ENST00000570874 OVOL1O14753 267 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms