RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SCGB2A1O75556 95 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 SLC25A4P12235 298 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 NPPCP23582 126 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 LYZP61626 148 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 GAMTQ14353 236 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 C12orf45Q8N5I9 185 aaPredicted RBP6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 STXBP6Q8NFX7 210 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 OR51G1Q8NGK1 321 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 MITD1Q8WV92 249 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 BATF3Q9NR55 127 aa6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 RCL1Q9Y2P8 373 aaKnown RBP6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 STRAPQ9Y3F4 350 aaKnown RBP6.74□□□□□ -1.33
GTF3C1-210ENST00000569394 PIGBOS1A0A0B4J2F0 54 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 TSPAN4O14817 238 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 SIX6O95475 246 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 METTL15P1P0C7V9 234 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 NHLRC4P0CG21 123 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 RD3LP0DJH9 198 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 PSG1P11464 419 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 SLC25A6P12236 298 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 BCAP31P51572 246 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 S100A10P60903 97 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 RPP30P78346 268 aaKnown RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 AKR1C1Q04828 323 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 USF2Q15853 346 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 LEMD1Q68G75 181 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 NRARPQ7Z6K4 114 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 FAM24BQ8N5W8 94 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 ZBTB8BQ8NAP8 495 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 OR4D5Q8NGN0 318 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 ZNF431Q8TF32 576 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 PPP1R14BQ96C90 147 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 CIB3Q96Q77 187 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 ATP6V0BQ99437 205 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 MS4A6AQ9H2W1 248 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 CACFD1Q9UGQ2 172 aa6.73□□□□□ -1.33
GTF3C1-210ENST00000569394 TRAV25A0A0B4J276 109 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 OR4C46A6NHA9 309 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 FAM90A26D6RGX4 464 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 L7N2F9 121 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 GOSR2O14653 212 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 MBPP02686 304 aaPredicted RBP6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 P2RY1P47900 373 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 VAMP2P63027 116 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 ASAH1Q13510 395 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 ODF3L2Q3SX64 289 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 NARS2Q96I59 477 aaKnown RBP6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 SPAG8Q99932 426 aaPredicted RBP6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 DOK5Q9P104 306 aa6.72□□□□□ -1.33
GTF3C1-210ENST00000569394 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 A0A1W2PS18 150 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 INMT-MINDY4F8WBC2 141 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 TOMM40O96008 361 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 HNRNPCP07910 306 aaKnown RBP eCLIP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 PRB4P10163 310 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 GPX4P36969 197 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 PAX9P55771 341 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 DEFB131AP59861 70 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 YPEL3P61236 119 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 PAFAH1B2P68402 229 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 LRRC37A5PQ49AS3 106 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 FAM90A2PQ658T7 463 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM182Q6ZP80 229 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 LINC00299Q6ZSB3 139 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 ACOT7LQ6ZUV0 252 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 RNF125Q96EQ8 232 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 GRAMD2BQ96HH9 432 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 WWC2-AS2Q96NR7 200 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 VSIRQ9H7M9 311 aa6.71□□□□□ -1.34
GTF3C1-210ENST00000569394 IGKV1OR2-108A0A075B7D4 117 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 FAM24AA6NFZ4 105 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 A8MZ25 164 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 K7EPK0 472 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 ZNF688P0C7X2 276 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 ORM2P19652 201 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 CRYBB3P26998 211 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 BMI1P35226 326 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 CAV2P51636 162 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 ZFAND6Q6FIF0 208 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM217Q8N7C4 229 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 SPATA25Q9BR10 227 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 TM2D3Q9BRN9 247 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 GGTLC1Q9BX51 225 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM231Q9H6L2 316 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 SLC25A22Q9H936 323 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 MAP6D1Q9H9H5 199 aa6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 GPN1Q9HCN4 374 aaPredicted RBP6.7□□□□□ -1.34
GTF3C1-210ENST00000569394 C7orf66A4D0T2 115 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 KNCNA6PVL3 124 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 SNRPGP15A8MWD9 76 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 PRSS46E5RG02 174 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 SSNA1O43805 119 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 CST7O76096 145 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 DEFA1P59665 94 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 DEFA3P59666 94 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms