RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 STRAPQ9Y3F4 350 aaKnown RBP7.33□□□□□ -1.24
CLK3-220ENST00000567992 U3KQE9 123 aa7.33□□□□□ -1.24
CLK3-220ENST00000567992 IGHV3-66A0A0C4DH42 116 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 FAM25EA8MYX2 175 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 K7EPK0 472 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 PRAF2O60831 178 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 TSC22D2O75157 780 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 SCGB2A1O75556 95 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 PSG1P11464 419 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 CRYBB3P26998 211 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 TAS2R30P59541 319 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 RPP30P78346 268 aaKnown RBP7.32□□□□□ -1.24
CLK3-220ENST00000567992 ZNF90Q03938 601 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 LINC00322Q6ZN03 302 aaPredicted RBP7.32□□□□□ -1.24
CLK3-220ENST00000567992 RBPMS2Q6ZRY4 209 aaKnown RBP7.32□□□□□ -1.24
CLK3-220ENST00000567992 ACOT7LQ6ZUV0 252 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 SBSPONQ8IVN8 264 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 C2orf50Q96LR7 162 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 HYLS1Q96M11 299 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 ASCL2Q99929 193 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 MED28Q9H204 178 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 PSENENQ9NZ42 101 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 PLA2G2EQ9NZK7 142 aa7.32□□□□□ -1.24
CLK3-220ENST00000567992 C5orf51A6NDU8 294 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 IL4P05112 153 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 ARL16Q0P5N6 197 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 FCN2Q15485 313 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 ODF3L2Q3SX64 289 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 GSG1LQ6UXU4 331 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 Q8WTZ3 238 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 METTL26Q96S19 204 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 TRGV9Q99603 122 aa7.31□□□□□ -1.24
CLK3-220ENST00000567992 GPN1Q9HCN4 374 aaPredicted RBP7.31□□□□□ -1.24
CLK3-220ENST00000567992 ZFP92A6NM28 416 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 OR11H12B2RN74 326 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 DFFBO76075 338 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 SIX6O95475 246 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 METTL15P1P0C7V9 234 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 RD3LP0DJH9 198 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 NPPCP23582 126 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 RAB32Q13637 225 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 Q5BKY6 102 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 LAMTOR1Q6IAA8 161 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 TMEM182Q6ZP80 229 aaPredicted RBP7.3□□□□□ -1.24
CLK3-220ENST00000567992 TCF24Q7RTU0 167 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 STPG3Q8N7X2 389 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 OR11H7Q8NGC8 314 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 OR51G1Q8NGK1 321 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 RNF125Q96EQ8 232 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 CITED4Q96RK1 184 aa7.3□□□□□ -1.24
CLK3-220ENST00000567992 LSM5Q9Y4Y9 91 aaKnown RBP7.3□□□□□ -1.24
CLK3-220ENST00000567992 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 RBMY1BA6NDE4 496 aaKnown RBP7.29□□□□□ -1.24
CLK3-220ENST00000567992 RBMY1EA6NEQ0 496 aaKnown RBP7.29□□□□□ -1.24
CLK3-220ENST00000567992 GOSR2O14653 212 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 RBMY1DP0C7P1 496 aaKnown RBP7.29□□□□□ -1.24
CLK3-220ENST00000567992 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
CLK3-220ENST00000567992 P2RY1P47900 373 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 H2BFSP57053 126 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 DLK1P80370 383 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 OR2F1Q13607 317 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 OR8G2PQ6IF36 304 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 C16orf54Q6UWD8 224 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 ZNF767PQ75MW2 155 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 GLMPQ8WWB7 406 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 TM2D3Q9BRN9 247 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 UBQLN2Q9UHD9 624 aa7.29□□□□□ -1.24
CLK3-220ENST00000567992 A0A1W2PS18 150 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 FAM24AA6NFZ4 105 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 OR4C46A6NHA9 309 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 FNDC10F2Z333 226 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 BUB3O43684 328 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 BMI1P35226 326 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 S100A10P60903 97 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 AKR1C1Q04828 323 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 HAGHQ16775 308 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 TMEM144Q7Z5S9 345 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 C9orf62Q8N4C0 152 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 GBGT1Q8N5D6 347 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 FAM110AQ9BQ89 295 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 NMES1Q9C002 83 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 TMEM231Q9H6L2 316 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 LYRM2Q9NU23 88 aaPredicted RBP7.28□□□□□ -1.24
CLK3-220ENST00000567992 RABAC1Q9UI14 185 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 STARD9Q9P2P6 4700 aa7.28□□□□□ -1.24
CLK3-220ENST00000567992 IGKV3-7A0A075B6H7 116 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 TRAV2A0A0B4J234 112 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 IGSF23A1L1A6 192 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 H0YIZ8 118 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 L7N2F9 121 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 DEDDO75618 318 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 CD5P06127 495 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 GATA2P23769 480 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms