RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RUSC1-AS1Q66K80 236 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 STXBP6Q8NFX7 210 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 FAM110DQ8TAY7 271 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-221ENST00000567935 TVP23CQ96ET8 276 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
COMMD4-221ENST00000567935 DMRT1Q9Y5R6 373 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 RYR3Q15413 4870 aa11.51□□□□□ -0.57
COMMD4-221ENST00000567935 KMT2CQ8NEZ4 4911 aaKnown RBP11.51□□□□□ -0.57
COMMD4-221ENST00000567935 B4DEV8 164 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 K7EIM0 57 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 M0R036 132 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 DNASE2O00115 360 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-221ENST00000567935 PAGE4O60829 102 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 APELAP0DMC3 54 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 NDPQ00604 133 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 FBLN7Q53RD9 439 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 S100A7AQ86SG5 101 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 TMPRSS5Q9H3S3 457 aa11.5□□□□□ -0.57
COMMD4-221ENST00000567935 MRPL36Q9P0J6 103 aaKnown RBP11.5□□□□□ -0.57
COMMD4-221ENST00000567935 A0A0U1RQK1 487 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 C11orf94C9JXX5 98 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 H3BQ15 152 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-221ENST00000567935 MFAP4P55083 255 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 AWAT1Q58HT5 328 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 OR4F5Q8NH21 305 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 TMEM190Q8WZ59 177 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 OR4F4Q96R69 305 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 TXN2Q99757 166 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
COMMD4-221ENST00000567935 TUBA4BQ9H853 241 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
COMMD4-221ENST00000567935 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
COMMD4-221ENST00000567935 A0A087WWC5 75 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 TCF21O43680 179 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 HYPMO75409 117 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 EGR2P11161 476 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-221ENST00000567935 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-221ENST00000567935 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
COMMD4-221ENST00000567935 CEBPGP53567 150 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 ZNF90Q03938 601 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 AKIRIN2Q53H80 203 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 SPATA31B1PQ5VZV4 182 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 CYB5R2Q6BCY4 276 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 PIFOQ8TCI5 191 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 VN1R17PQ8TDU5 208 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 SSX3Q99909 188 aa11.48□□□□□ -0.57
COMMD4-221ENST00000567935 GAR1Q9NY12 217 aaKnown RBP11.48□□□□□ -0.57
COMMD4-221ENST00000567935 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 A6NDX4 124 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 ZNF727A8MUV8 499 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 EIF3GO75821 320 aaKnown RBP eCLIP11.47□□□□□ -0.57
COMMD4-221ENST00000567935 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-221ENST00000567935 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-221ENST00000567935 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 C19orf35Q6ZS72 473 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 TEX29Q8N6K0 151 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 SMIM7Q9BQ49 75 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 RNF24Q9Y225 148 aa11.47□□□□□ -0.57
COMMD4-221ENST00000567935 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 FAM74A7A6NL05 159 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 OR7C2O60412 319 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 TOMM40O96008 361 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 TGFAP01135 160 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 S100A7P31151 101 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 UNQ5815/PRO19632Q6UWF5 114 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 HSPB9Q9BQS6 159 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 RPS10P5Q9NQ39 176 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 ZNF355PQ9NSJ1 428 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
COMMD4-221ENST00000567935 CMYA5Q8N3K9 4069 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 ATP6V0E1O15342 81 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 GNG7O60262 68 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 BRI3O95415 125 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 PATE2Q6UY27 113 aa11.45□□□□□ -0.58
COMMD4-221ENST00000567935 C9orf139Q6ZV77 190 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms