RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 COQ8AQ8NI60 647 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 GLMPQ8WWB7 406 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 TRGV9Q99603 122 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 MFFQ9GZY8 342 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
CDH3-206ENST00000567674 MRPL36Q9P0J6 103 aaKnown RBP8.24□□□□□ -1.09
CDH3-206ENST00000567674 UBQLN2Q9UHD9 624 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 FNDC10F2Z333 226 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 IFNA21P01568 189 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
CDH3-206ENST00000567674 IL4P05112 153 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 VAMP1P23763 118 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 GAMTQ14353 236 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 LYG2Q86SG7 212 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 LILRB2Q8N423 598 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 RNF125Q96EQ8 232 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 C1QTNF4Q9BXJ3 329 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 HRH4Q9H3N8 390 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 RETNQ9HD89 108 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 NRN1Q9NPD7 142 aa8.23□□□□□ -1.09
CDH3-206ENST00000567674 KLK5Q9Y337 293 aaPredicted RBP8.23□□□□□ -1.09
CDH3-206ENST00000567674 C9orf170A2RU37 121 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 PSG1P11464 419 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 MEOX2P50222 304 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 TAS2R30P59541 319 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 DEFB131AP59861 70 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 PPP1R1AQ13522 171 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 APRG1Q8IVJ8 170 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 OR4D5Q8NGN0 318 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 GPR82Q96P67 336 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 RARRES2Q99969 163 aa8.22□□□□□ -1.09
CDH3-206ENST00000567674 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 ZFP92A6NM28 416 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 NXPH3O95157 252 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 OR4E1P0C645 316 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 MIFP14174 115 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 NKX2-1P43699 371 aaPredicted RBP8.21□□□□□ -1.1
CDH3-206ENST00000567674 DHRS2Q13268 280 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.1
CDH3-206ENST00000567674 C4orf46Q504U0 113 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 TRPT1Q86TN4 253 aaKnown RBP8.21□□□□□ -1.1
CDH3-206ENST00000567674 GBGT1Q8N5D6 347 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
CDH3-206ENST00000567674 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 PRSS46E5RG02 174 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 RPL35AP18077 110 aaKnown RBP8.2□□□□□ -1.1
CDH3-206ENST00000567674 ID1P41134 155 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 TFPI2P48307 235 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 SELENOTP62341 195 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 BAK1Q16611 211 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
CDH3-206ENST00000567674 TMEM144Q7Z5S9 345 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 STXBP6Q8NFX7 210 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 SMIM8Q96KF7 97 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 RAB40CQ96S21 281 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 CCDC32Q9BV29 185 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 GGACTQ9BVM4 153 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 STRAPQ9Y3F4 350 aaKnown RBP8.2□□□□□ -1.1
CDH3-206ENST00000567674 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 HERC2O95714 4834 aa8.2□□□□□ -1.1
CDH3-206ENST00000567674 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
CDH3-206ENST00000567674 IGKV3-7A0A075B6H7 116 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 IGKV1D-37A0A075B6S9 117 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 ZNF705EA8MWA4 302 aaPredicted RBP8.19□□□□□ -1.1
CDH3-206ENST00000567674 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 CA1P00915 261 aaPredicted RBP8.19□□□□□ -1.1
CDH3-206ENST00000567674 PSMB3P49720 205 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 PXDC1Q5TGL8 231 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 BPIFCQ8NFQ6 507 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 OR11H2Q8NH07 326 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 MITD1Q8WV92 249 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 PRR13Q9NZ81 148 aa8.19□□□□□ -1.1
CDH3-206ENST00000567674 IGHV3-66A0A0C4DH42 116 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 K7EPK0 472 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 WRBO00258 174 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 ISLRO14498 428 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 TSC22D2O75157 780 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 HOXB5P09067 269 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 IL7P13232 177 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 PLP1P60201 277 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 NEU1Q99519 415 aa8.18□□□□□ -1.1
CDH3-206ENST00000567674 SDHCQ99643 169 aaPredicted RBP8.18□□□□□ -1.1
CDH3-206ENST00000567674 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 LEMD1Q68G75 181 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 FAM24BQ8N5W8 94 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 OR1B1Q8NGR6 318 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 S100ZQ8WXG8 99 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 NPVFQ9HCQ7 196 aa8.17□□□□□ -1.1
CDH3-206ENST00000567674 IGKV1OR2-108A0A075B7D4 117 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 TMEM189A5PLL7 270 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 CXorf65A6NEN9 183 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms