RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CTRLP40313 264 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 OR10J3Q5JRS4 329 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 PVRIGQ6DKI7 326 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 GNB1LQ9BYB4 327 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 PLXNB1O43157 2135 aa18.62■□□□□ 0.57
LINC00543-201ENST00000567234 TENM4Q6N022 2769 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 NUPR1O60356 82 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 DEFA4P12838 97 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 COMPP49747 757 aaPredicted RBP18.61■□□□□ 0.57
LINC00543-201ENST00000567234 LDLRAD2Q5SZI1 272 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 WDR73Q6P4I2 378 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 C19orf24Q9BVV8 132 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 DNAJC4Q9NNZ3 241 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 TP53TG3Q9ULZ0 132 aa18.61■□□□□ 0.57
LINC00543-201ENST00000567234 IGLC7A0M8Q6 106 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 C9JCJ5 164 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 TOMM40O96008 361 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 CNTFRP26992 372 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 CLEC12BQ2HXU8 276 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 LEMD1Q68G75 181 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 ARL2-SNX15V9GYD0 113 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 IGKV1OR2-108A0A075B7D4 117 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 TIMM23O14925 209 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 RPS20P60866 119 aaKnown RBP18.6■□□□□ 0.57
LINC00543-201ENST00000567234 TNXAQ16473 311 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 SIGLECL1Q8N7X8 197 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 NAV3Q8IVL0 2385 aa18.6■□□□□ 0.57
LINC00543-201ENST00000567234 AKAP6Q13023 2319 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 OOSP1A8MZH6 123 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 ZFP36P26651 326 aaKnown RBP18.59■□□□□ 0.57
LINC00543-201ENST00000567234 CDKN1BP46527 198 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 LINC00310P59036 64 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 PAX2Q02962 417 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 IGFBPL1Q8WX77 278 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 C22orf15Q8WYQ4 148 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 CFHR4Q92496 578 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 SRSF8Q9BRL6 282 aaKnown RBP18.59■□□□□ 0.57
LINC00543-201ENST00000567234 CDC42EP3Q9UKI2 254 aa18.59■□□□□ 0.57
LINC00543-201ENST00000567234 MRPS16Q9Y3D3 137 aaKnown RBP18.59■□□□□ 0.57
LINC00543-201ENST00000567234 SERF1AO75920 110 aa18.58■□□□□ 0.57
LINC00543-201ENST00000567234 SUMO1P63165 101 aaKnown RBP18.58■□□□□ 0.57
LINC00543-201ENST00000567234 MINOS1Q5TGZ0 78 aa18.58■□□□□ 0.57
LINC00543-201ENST00000567234 SAMD10Q9BYL1 202 aa18.58■□□□□ 0.57
LINC00543-201ENST00000567234 MRPL18Q9H0U6 180 aaKnown RBP18.58■□□□□ 0.57
LINC00543-201ENST00000567234 PAM16Q9Y3D7 125 aa18.58■□□□□ 0.57
LINC00543-201ENST00000567234 MINOS1-NBL1R4GNA1 71 aa18.58■□□□□ 0.57
LINC00543-201ENST00000567234 MT-CO2P00403 227 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 ARL14EPLP0DKL9 152 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 MLANAQ16655 118 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 ETFRF1Q6IPR1 90 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 CCDC144NLQ6NUI1 221 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 VMO1Q7Z5L0 202 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 BAGE3Q86Y29 109 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 BAGE2Q86Y30 109 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 C11orf52Q96A22 123 aa18.58■□□□□ 0.56
LINC00543-201ENST00000567234 J3QKU1 62 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 NDUFB4O95168 129 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 GPX1P07203 203 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 OR10J4P0C629 311 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 ZNF90Q03938 601 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 KLRD1Q13241 179 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 C19orf35Q6ZS72 473 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 GATAD1Q8WUU5 269 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 SPOCK3Q9BQ16 436 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 SIRPDQ9H106 197 aa18.57■□□□□ 0.56
LINC00543-201ENST00000567234 CORTO00230 105 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 LGALS4P56470 323 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 VN1R17PQ8TDU5 208 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 FBXL15Q9H469 300 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 GSX1Q9H4S2 264 aaPredicted RBP18.56■□□□□ 0.56
LINC00543-201ENST00000567234 FNDC4Q9H6D8 234 aaPredicted RBP18.56■□□□□ 0.56
LINC00543-201ENST00000567234 SEPSECSQ9HD40 501 aaKnown RBP18.56■□□□□ 0.56
LINC00543-201ENST00000567234 IGHV2-70DA0A0C4DH43 119 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 LMO4P61968 165 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 THAP8Q8NA92 274 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 NPBQ8NG41 125 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 OR2T6Q8NHC8 308 aa18.56■□□□□ 0.56
LINC00543-201ENST00000567234 CRYBG3Q68DQ2 2970 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 TCF21O43680 179 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 ZNF253O75346 499 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 MOSP00540 346 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 BPESC1Q9GZL8 116 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 LAMTOR2Q9Y2Q5 125 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 HILPDAQ9Y5L2 63 aa18.55■□□□□ 0.56
LINC00543-201ENST00000567234 DIRC3C9JPN6 131 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 NDUFA3O95167 84 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 CRYGCP07315 174 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 IGLC2P0DOY2 106 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 IGLC3P0DOY3 106 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 HOXB4P17483 251 aaPredicted RBP18.54■□□□□ 0.56
LINC00543-201ENST00000567234 RBX1P62877 108 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 LHFPL4Q7Z7J7 247 aa18.54■□□□□ 0.56
LINC00543-201ENST00000567234 USP9YO00507 2555 aaPredicted RBP18.54■□□□□ 0.56
LINC00543-201ENST00000567234 TEX22C9J3V5 150 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 NBR2O15453 112 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 OR5G3P0C626 314 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 COL8A1P27658 744 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 GCHFRP30047 84 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 PMCHL1Q16048 86 aa18.53■□□□□ 0.56
LINC00543-201ENST00000567234 Q8N976 141 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms