RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 A0A1W2PPI3 338 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 PROP1O75360 226 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 TAS2R60P59551 318 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 GPR82Q96P67 336 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 WDFY4Q6ZS81 3184 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 GGCTO75223 188 aaKnown RBP9.4□□□□□ -0.9
CDH1-210ENST00000566612 ZNF25P17030 456 aaPredicted RBP9.4□□□□□ -0.9
CDH1-210ENST00000566612 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
CDH1-210ENST00000566612 CPAMD8Q8IZJ3 1885 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 FRYLO94915 3013 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 ITGB1BP1O14713 200 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 NBR2O15453 112 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 PSG1P11464 419 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 BRWD1-AS2P59051 145 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 LY6EQ16553 131 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 SPATA45Q537H7 98 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 REC114Q7Z4M0 266 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 PRSS33Q8NF86 280 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.91
CDH1-210ENST00000566612 CHD3Q12873 2000 aaKnown RBP9.4□□□□□ -0.91
CDH1-210ENST00000566612 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 TCF15Q12870 199 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 VAMP3Q15836 100 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 C11orf42Q8N5U0 333 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 Q8TCH9 128 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 LOXP28300 417 aaPredicted RBP9.39□□□□□ -0.91
CDH1-210ENST00000566612 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 GRAMD2BQ96HH9 432 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 TRBV9A0A0B4J1U6 114 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 C21orf62Q9NYP8 219 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 SIGLEC9Q9Y336 463 aa9.39□□□□□ -0.91
CDH1-210ENST00000566612 LHBP01229 141 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 ASCL2Q99929 193 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 GPR183P32249 361 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 HBBP68871 147 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 BUB1B-PAK6H3BSN5 160 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 GZMBP10144 247 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 NPPCP23582 126 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 GRNP28799 593 aaKnown RBP9.38□□□□□ -0.91
CDH1-210ENST00000566612 TWIST1Q15672 202 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 ARPC1AQ92747 370 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 MAP1LC3CQ9BXW4 147 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
CDH1-210ENST00000566612 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 PMS2P5A8MQ11 134 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 CEACAM4O75871 244 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 ZNF600Q6ZNG1 722 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 NRN1Q9NPD7 142 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 FCER1GP30273 86 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 RELQ04864 619 aaPredicted RBP9.37□□□□□ -0.91
CDH1-210ENST00000566612 TMEM155Q4W5P6 130 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 RABAC1Q9UI14 185 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 K7ENP7 123 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 RPL7P18124 248 aaKnown RBP9.37□□□□□ -0.91
CDH1-210ENST00000566612 TEX36Q5VZQ5 186 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 CENPVQ7Z7K6 275 aaPredicted RBP9.37□□□□□ -0.91
CDH1-210ENST00000566612 ST6GALNAC3Q8NDV1 305 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
CDH1-210ENST00000566612 NCKAP5O14513 1909 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 C9JCJ5 164 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 BMPR1BO00238 502 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 CTSZQ9UBR2 303 aa9.37□□□□□ -0.91
CDH1-210ENST00000566612 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 HLA-DRB1P01911 266 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 RNF224P0DH78 156 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 PF4V1P10720 104 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 NEU4Q8WWR8 484 aaPredicted RBP9.36□□□□□ -0.91
CDH1-210ENST00000566612 C14orf144Q96I85 54 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 THBDP07204 575 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 EXPH5Q8NEV8 1989 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 PRSS1P07477 247 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 HINT1P49773 126 aaPredicted RBP9.36□□□□□ -0.91
CDH1-210ENST00000566612 CTAG1AP78358 180 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
CDH1-210ENST00000566612 CDC42EP3Q9UKI2 254 aa9.36□□□□□ -0.91
CDH1-210ENST00000566612 OR4B1Q8NGF8 309 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 C8orf46Q8TAG6 207 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
CDH1-210ENST00000566612 TNFRSF14Q92956 283 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms