RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MS4A6AQ9H2W1 248 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 CBLN4Q9NTU7 201 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 ZNF835Q9Y2P0 537 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 SIGLEC9Q9Y336 463 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 GOLT1BQ9Y3E0 138 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 IGHV2-26A0A0B4J1V2 119 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 A0A0G2JNJ9 132 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 A0A1W2PPI3 338 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 M0R1W7 72 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 IGLV2-23P01705 113 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 TCRAP04437 139 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 ZNF25P17030 456 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-249ENST00000564606 NTF3P20783 257 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 LOXP28300 417 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-249ENST00000564606 BMI1P35226 326 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-249ENST00000564606 TCL1AP56279 114 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 FAM201AQ5SY85 155 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 OR10W1Q8NGF6 305 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 IGFBPL1Q8WX77 278 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 ZNF48Q96MX3 618 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-249ENST00000564606 ALKBH7Q9BT30 221 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-249ENST00000564606 Q9H3A6 140 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 CLEC5AQ9NY25 188 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 Q9UFV3 132 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 CACNA1DQ01668 2161 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 MED13Q9UHV7 2174 aa6.14□□□□□ -1.43
ATXN3-249ENST00000564606 ZDBF2Q9HCK1 2354 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 PPIAL4CA0A0B4J2A2 164 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 IGHV1-3A0A0C4DH29 117 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 IGLC7A0M8Q6 106 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 FAM181BA6NEQ2 426 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 BUB1B-PAK6H3BSN5 160 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 K7EM74 188 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 DLEU1O43261 78 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 C3orf79P0CE67 100 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 PPIAL4GP0DN37 164 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 CCL3L1P16619 93 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 GATA2P23769 480 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-249ENST00000564606 HTR1DP28221 377 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 MFAP4P55083 255 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 FOXA3P55318 350 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-249ENST00000564606 DLX6P56179 175 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
ATXN3-249ENST00000564606 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 NEU4Q8WWR8 484 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-249ENST00000564606 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 GSX1Q9H4S2 264 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-249ENST00000564606 DPM3Q9P2X0 92 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 LAMTOR2Q9Y2Q5 125 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 DOCK11Q5JSL3 2073 aa6.13□□□□□ -1.43
ATXN3-249ENST00000564606 XIRP2A4UGR9 3374 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 IGKV1D-37A0A075B6S9 117 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 FAM186AA6NE01 2351 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 CRXO43186 299 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 TOX4O94842 621 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 IGLV1-47P01700 117 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 CRYGBP07316 175 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 IGLC2P0DOY2 106 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 PYYP10082 97 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 GP9P14770 177 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 RPL7P18124 248 aaKnown RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 CAMPP49913 170 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 LYZP61626 148 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 C1orf122Q6ZSJ8 110 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 FA2HQ7L5A8 372 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 NIT1Q86X76 327 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 SPACA3Q8IXA5 215 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 KIR3DL3Q8N743 410 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 DPF1Q92782 380 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 SLC25A39Q9BZJ4 359 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 FNDC4Q9H6D8 234 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-249ENST00000564606 FBXL7Q9UJT9 491 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 TP53TG3Q9ULZ0 132 aa6.12□□□□□ -1.43
ATXN3-249ENST00000564606 HEATR1Q9H583 2144 aaKnown RBP6.11□□□□□ -1.43
ATXN3-249ENST00000564606 HCFC1P51610 2035 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 PTPRBP23467 1997 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 NPIPB5A8MRT5 1133 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 NBR2O15453 112 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 GNG7O60262 68 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 NUPR1O60356 82 aa6.11□□□□□ -1.43
ATXN3-249ENST00000564606 SPINK4O60575 86 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms