RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 UBBP0CG47 229 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 LGALS3P17931 250 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 SPI1P17947 270 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 PHBP35232 272 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 LPAR6P43657 344 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 RBP2P50120 134 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 PIGPP57054 158 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 RELAQ04206 551 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TAF9Q16594 264 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SPATA12Q7Z6I5 190 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SLC22A24Q8N4F4 322 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 OR13C4Q8NGS5 318 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SGMS2Q8NHU3 365 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 DOHHQ9BU89 302 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TMEM126AQ9H061 195 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 RNASE7Q9H1E1 156 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 CALML5Q9NZT1 146 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 PXMP4Q9Y6I8 212 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 FMN2Q9NZ56 1722 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 PRR14LQ5THK1 2151 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF638Q14966 1978 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 BORCS7-ASMTA0A0B4J1R7 106 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 LST1O00453 97 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TP53I11O14683 189 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 APOA2P02652 100 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 MPC1LP0DKB6 136 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF25P17030 456 aaPredicted RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 RBM11P57052 281 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 RPS28P62857 69 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 GNG5P63218 68 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 OR8B8Q15620 311 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TNFAIP8L3Q5GJ75 292 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 HAGHLQ6PII5 290 aaPredicted RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF322Q6U7Q0 402 aaPredicted RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 C20orf196Q8IYI0 205 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 FAM24BQ8N5W8 94 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 CNEP1R1Q8N9A8 125 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SLC30A7Q8NEW0 376 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 OR11H6Q8NGC7 330 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 RAB2BQ8WUD1 216 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 THEM6Q8WUY1 208 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 CANT1Q8WVQ1 401 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SERPINI1Q99574 410 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 HSPB9Q9BQS6 159 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ULBP3Q9BZM4 244 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TMEM222Q9H0R3 208 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 PRTFDC1Q9NRG1 225 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 HSPB8Q9UJY1 196 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SSR3Q9UNL2 185 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF609O15014 1411 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 GCC2Q8IWJ2 1684 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ALS2Q96Q42 1657 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 SIGLEC16A6NMB1 481 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 G3V2T6 193 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 J3KT08 172 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 K7ERU9 68 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 HLA-DQB2P05538 268 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TSPAN19P0C672 248 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 METTL15P1P0C7V9 234 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 FGF6P10767 208 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 FUSP35637 526 aaKnown RBP eCLIP1.26□□□□□ -2.21
CHD9-209ENST00000564255 GABRA2P47869 451 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 HCP5Q6MZN7 132 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 AGTRAPQ6RW13 159 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF283Q8N7M2 679 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 DAND5Q8N907 189 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 OR8B12Q8NGG6 310 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 OR2T4Q8NH00 348 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 CLDND2Q8NHS1 167 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ZNF675Q8TD23 568 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 GNPDA2Q8TDQ7 276 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 ACOT12Q8WYK0 555 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 GPR146Q96CH1 333 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 MGLLQ99685 303 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 TXNL4BQ9NX01 149 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 MRPL16Q9NX20 251 aaKnown RBP1.26□□□□□ -2.21
CHD9-209ENST00000564255 FAM215AQ9Y5M1 114 aa1.26□□□□□ -2.21
CHD9-209ENST00000564255 KIF13BQ9NQT8 1826 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 ARFGEF1Q9Y6D6 1849 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 RTL1A6NKG5 1358 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 TONSLQ96HA7 1378 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 MED23Q9ULK4 1368 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 MYOM3Q5VTT5 1437 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 DSCAMO60469 2012 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 RBBP6Q7Z6E9 1792 aaKnown RBP1.25□□□□□ -2.21
CHD9-209ENST00000564255 TRAV36DV7A0A075B6V5 113 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 TRAV26-2A0A0B4J265 109 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 FAM92AA1XBS5 289 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 TMEM189A5PLL7 270 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 INMT-MINDY4F8WBC2 141 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 H7C1C5 153 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 IGHV1-69P01742 117 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 SERPINE1P05121 402 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 DBIP07108 87 aaKnown RBP1.25□□□□□ -2.21
CHD9-209ENST00000564255 CTSGP08311 255 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 BLVRBP30043 206 aaPredicted RBP1.25□□□□□ -2.21
CHD9-209ENST00000564255 SRIP30626 198 aa1.25□□□□□ -2.21
CHD9-209ENST00000564255 LCN6P62502 163 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms