RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 RHOBP62745 196 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 DEFA5Q01523 94 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 ZNF726P1Q15940 193 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 TIGITQ495A1 244 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 IL34Q6ZMJ4 242 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 ZNF600Q6ZNG1 722 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 OR51G1Q8NGK1 321 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 WFDC12Q8WWY7 111 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 KLK15Q9H2R5 256 aa10.8□□□□□ -0.68
CLK3-209ENST00000562670 OR2T8A6NH00 312 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 GPR183P32249 361 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 ADMP35318 185 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 RELQ04864 619 aaPredicted RBP10.79□□□□□ -0.68
CLK3-209ENST00000562670 PMS2P11Q13670 270 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 KIAA0141Q14154 515 aaPredicted RBP10.79□□□□□ -0.68
CLK3-209ENST00000562670 GCSAMLQ5JQS6 135 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 ZNF329Q86UD4 541 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 DNAJC4Q9NNZ3 241 aa10.79□□□□□ -0.68
CLK3-209ENST00000562670 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 MAP1LC3B2A6NCE7 125 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 COX7A2P2O60397 106 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 CLEC3BP05452 202 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
CLK3-209ENST00000562670 FAM122CQ6P4D5 195 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 KLHDC1Q8N7A1 406 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 Q8WTZ3 238 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 PCNPQ8WW12 178 aaKnown RBP10.78□□□□□ -0.68
CLK3-209ENST00000562670 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 CHRDL1Q9BU40 450 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 MAP1LC3BQ9GZQ8 125 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 PFDN2Q9UHV9 154 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 FUT9Q9Y231 359 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 S4R3C0 116 aa10.78□□□□□ -0.68
CLK3-209ENST00000562670 A0A1W2PPV4 95 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 HYPMO75409 117 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 IGHV3-23P01764 117 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 TAS2R45P59539 299 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 SSX7Q7RTT5 188 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
CLK3-209ENST00000562670 OR4X2Q8NGF9 303 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 OR4F5Q8NH21 305 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 LINC01006Q8NI28 216 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 TMEM37Q8WXS4 190 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 RNF125Q96EQ8 232 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 ZNF414Q96IQ9 312 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 RNF24Q9Y225 148 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 CUBNO60494 3623 aa10.77□□□□□ -0.69
CLK3-209ENST00000562670 RAB19A4D1S5 217 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
CLK3-209ENST00000562670 S100A7P31151 101 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 FAM78BQ5VT40 261 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 C10orf99Q6UWK7 81 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 ZFAND3Q9H8U3 227 aa10.76□□□□□ -0.69
CLK3-209ENST00000562670 SEPSECSQ9HD40 501 aaKnown RBP10.76□□□□□ -0.69
CLK3-209ENST00000562670 MRPL27Q9P0M9 148 aaKnown RBP10.76□□□□□ -0.69
CLK3-209ENST00000562670 A0A1B0GUS0 222 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 BMPR1BO00238 502 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 CXorf1O96002 111 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 IL4P05112 153 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
CLK3-209ENST00000562670 ARL3P36405 182 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 TAGLN2P37802 199 aaKnown RBP10.75□□□□□ -0.69
CLK3-209ENST00000562670 CDX1P47902 265 aaPredicted RBP10.75□□□□□ -0.69
CLK3-209ENST00000562670 PPT1P50897 306 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 LYZP61626 148 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 KHDC3LQ587J8 217 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 STXBP6Q8NFX7 210 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 OR1B1Q8NGR6 318 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 MARC2Q969Z3 335 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 TECRQ9NZ01 308 aaKnown RBP10.75□□□□□ -0.69
CLK3-209ENST00000562670 PEF1Q9UBV8 284 aaKnown RBP10.75□□□□□ -0.69
CLK3-209ENST00000562670 HIGD1AQ9Y241 93 aa10.75□□□□□ -0.69
CLK3-209ENST00000562670 PUS1Q9Y606 427 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLK3-209ENST00000562670 H3BRN7 92 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 NDUFA4O00483 81 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 GGCTO75223 188 aaKnown RBP10.74□□□□□ -0.69
CLK3-209ENST00000562670 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
CLK3-209ENST00000562670 C8orf88P0DMB2 117 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 ORM2P19652 201 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 PSMB3P49720 205 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 UQCC3Q6UW78 93 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 LCN15Q6UWW0 184 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 OR5AU1Q8NGC0 362 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 ARL2-SNX15V9GYD0 113 aa10.74□□□□□ -0.69
CLK3-209ENST00000562670 CLPSL1A2RUU4 121 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms