RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 Q6P435 159 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 ACP7Q6ZNF0 438 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 RPRMLQ8N4K4 120 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 PLPPR2Q96GM1 343 aa11.41□□□□□ -0.58
GTF3C1-203ENST00000562609 LINC00473A8K010 186 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 GRPP07492 148 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 GNG3P63215 75 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 IGFL2Q6UWQ7 119 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 SLC25A10Q9UBX3 287 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 NBASA2RRP1 2371 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 SPTA1P02549 2419 aa11.4□□□□□ -0.58
GTF3C1-203ENST00000562609 A0A1B0GXF2 115 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 KLK10O43240 276 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 OR2H2O95918 312 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 MPV17P39210 176 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 Q6ZT83 130 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 MRAP2Q96G30 205 aa11.4□□□□□ -0.59
GTF3C1-203ENST00000562609 ZZEF1O43149 2961 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 GFRA3O60609 400 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 TFF1P04155 84 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 SPATA25Q9BR10 227 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 J3QR89 54 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 HBBP68871 147 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 PRAMEF5Q5TYX0 476 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 PRAMEF6Q5VXH4 476 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 MBNL3Q9NUK0 354 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 DKK4Q9UBT3 224 aa11.39□□□□□ -0.59
GTF3C1-203ENST00000562609 A1L4Q6 167 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 NCR2O95944 276 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 FAM231DQ6ZW35 169 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 ATP5L2Q7Z4Y8 100 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 MPC1Q9Y5U8 109 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 CSN3P07498 182 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 FAM87AP0C7U9 286 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 ZNF137PP52743 207 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR20EP86478 221 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR20CP86479 221 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR20DP86480 221 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR20BP86481 221 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 PRR20AP86496 221 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 GALMQ96C23 342 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 NABP2Q9BQ15 211 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 IGF2RP11717 2491 aa11.38□□□□□ -0.59
GTF3C1-203ENST00000562609 SPTBN4Q9H254 2564 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 LTC4SQ16873 150 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 TM4SF20Q53R12 229 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 VKORC1L1Q8N0U8 176 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 ZADH2Q8N4Q0 377 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 TIMM23BQ5SRD1 257 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 FOXI2Q6ZQN5 318 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 OBP2BQ9NPH6 170 aa11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-203ENST00000562609 WFDC2Q14508 124 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 SEM1Q6ZVN7 128 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 WDR31Q8NA23 367 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 C12orf77C9JDV5 145 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 BOD1L2Q8IYS8 172 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 C19orf24Q9BVV8 132 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 WNT9BO14905 357 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 IGHV3-7P01780 117 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 SPAG8Q99932 426 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 VGLL1Q99990 258 aa11.36□□□□□ -0.59
GTF3C1-203ENST00000562609 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 CECR9P0C854 216 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 RTL8AQ9BWD3 113 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 AMMECR1Q9Y4X0 333 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 FCGR3BO75015 233 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 SMIM13P0DJ93 91 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 C5orf64Q2M2E5 130 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 ABHD17AQ96GS6 310 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 ZNF747Q9BV97 191 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 FAM234AQ9H0X4 552 aa11.35□□□□□ -0.59
GTF3C1-203ENST00000562609 J3QT63 122 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 INO80CQ6PI98 192 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 INSIG2Q9Y5U4 225 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 IGHV3-43A0A0B4J1X8 118 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 DEFB108AA8MXU0 73 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 IGHV3-43DP0DP04 118 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 OR4X2Q8NGF9 303 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
GTF3C1-203ENST00000562609 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms