RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FAM53AQ6NSI3 398 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-206ENST00000561781 CACNG8Q8WXS5 425 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 ARPC1AQ92747 370 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 KLRD1Q13241 179 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 EIF4EBP1Q13541 118 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-206ENST00000561781 LCNL1Q6ZST4 164 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 ANAPC13Q9BS18 74 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 LINC00312Q9Y6C7 94 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 ITPR1Q14643 2758 aa15.17■□□□□ 0.02
RAB40C-206ENST00000561781 CSN1S1P47710 185 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 LINC00205P59089 165 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 Q6P435 159 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 MPC1Q9Y5U8 109 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 J3KRW8 73 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 TNFRSF13BO14836 293 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-206ENST00000561781 AAED1Q7RTV5 226 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 C1orf159Q96HA4 380 aa15.16■□□□□ 0.02
RAB40C-206ENST00000561781 VDAC2P45880 294 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-206ENST00000561781 PPP1R32Q7Z5V6 425 aa15.15■□□□□ 0.02
RAB40C-206ENST00000561781 TMUB1Q9BVT8 246 aa15.15■□□□□ 0.02
RAB40C-206ENST00000561781 RAXQ9Y2V3 346 aa15.15■□□□□ 0.02
RAB40C-206ENST00000561781 A8MWL6 223 aa15.15■□□□□ 0.02
RAB40C-206ENST00000561781 ACTL6BO94805 426 aa15.15■□□□□ 0.02
RAB40C-206ENST00000561781 RALYQ9UKM9 306 aaKnown RBP15.15■□□□□ 0.02
RAB40C-206ENST00000561781 E9PLD3 99 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 LIFP15018 202 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR20EP86478 221 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR20CP86479 221 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR20DP86480 221 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR20BP86481 221 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR20AP86496 221 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 CR1LQ2VPA4 569 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 GAGE13Q4V321 117 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 TMEM116Q8NCL8 245 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 TIMM8BQ9Y5J9 83 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-206ENST00000561781 TNFRSF18Q9Y5U5 241 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 NKX2-8O15522 239 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 KLK10O43240 276 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 NCR2O95944 276 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 PRR31Q5SQ13 230 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 MBNL3Q9NUK0 354 aaKnown RBP15.14■□□□□ 0.01
RAB40C-206ENST00000561781 AP5S1Q9NUS5 200 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 B4GALT7Q9UBV7 327 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 EPG5Q9HCE0 2579 aa15.14■□□□□ 0.01
RAB40C-206ENST00000561781 CACNA1GO43497 2377 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 OR2H2O95918 312 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 MRPL14Q6P1L8 145 aaKnown RBP15.13■□□□□ 0.01
RAB40C-206ENST00000561781 C20orf78Q9BR46 151 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 DEFB126Q9BYW3 111 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 CDIP1Q9H305 208 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 PIEZO2Q9H5I5 2752 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 PCSK5Q92824 1860 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 IGLV3-12A0A075B6K2 115 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 C5orf49A4QMS7 147 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 MGST3O14880 152 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 GCSHP23434 173 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 LGALS9BQ3B8N2 356 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 LGALS9CQ6DKI2 356 aa15.13■□□□□ 0.01
RAB40C-206ENST00000561781 PHLDA1Q8WV24 401 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-206ENST00000561781 PKD1L2Q7Z442 2459 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 ZNF716A6NP11 495 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 B5MCH6 92 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 IGHV3-9P01782 118 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 ZNF138P52744 262 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 SYT8Q8NBV8 401 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 ZNF503Q96F45 646 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 HIF1ANQ9NWT6 349 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 PTPRQQ9UMZ3 2332 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 USP24Q9UPU5 2620 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 LINC00473A8K010 186 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 CD24P25063 80 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 INSL3P51460 131 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 DSCR4P56555 118 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-206ENST00000561781 IGF2-ASQ6U949 168 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 BCL6BQ8N143 479 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-206ENST00000561781 C18orf15Q96N68 181 aa15.12■□□□□ 0.01
RAB40C-206ENST00000561781 FAM90A9PA6NNJ1 464 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 CNIH1O95406 144 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 FXYD2P54710 66 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 RPL32P62910 135 aaKnown RBP15.11■□□□□ 0.01
RAB40C-206ENST00000561781 Q6ZUT4 128 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 ABHD12Q8N2K0 398 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 RAX2Q96IS3 184 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 HIGD1BQ9P298 99 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 A0A1B0GW15 77 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 H3BMG7 143 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 CHEK1O14757 476 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 APOMO95445 188 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 NGFP01138 241 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 MT-ATP8P03928 68 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 ERVK11-1P61568 191 aa15.11■□□□□ 0.01
RAB40C-206ENST00000561781 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
RAB40C-206ENST00000561781 LINC00696Q6ZRV3 163 aa15.1■□□□□ 0.01
RAB40C-206ENST00000561781 ATP6V0E2Q8NHE4 81 aa15.1■□□□□ 0.01
RAB40C-206ENST00000561781 NABP2Q9BQ15 211 aa15.1■□□□□ 0.01
RAB40C-206ENST00000561781 PRRC2CQ9Y520 2896 aaKnown RBP15.1■□□□□ 0.01
RAB40C-206ENST00000561781 CCL3P10147 92 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 GNG3P63215 75 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 FOXI1Q12951 378 aa15.09■□□□□ 0.01
RAB40C-206ENST00000561781 TM4SF20Q53R12 229 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms