RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SNRPD3P62318 126 aaKnown RBP8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 SRSF1Q07955 248 aaKnown RBP eCLIP8.46□□□□□ -1.052e-7■■■□□ 19.1
GTF3C1-202ENST00000561623 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 IQCF6A8MYZ5 107 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 D6R8Y8 96 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 TM4SF5O14894 197 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 IGKV1-5P01602 117 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 TMEM155Q4W5P6 130 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 NMSQ5H8A3 153 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 CNOT1A5YKK6 2376 aaKnown RBP8.46□□□□□ -1.05
GTF3C1-202ENST00000561623 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 LHX2P50458 406 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 FAM27E3Q08E93 113 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 PSMG4Q5JS54 123 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 FLVCR1-AS1Q8TAF5 88 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 GVINP1Q7Z2Y8 2422 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 TP53BP1Q12888 1972 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 YPEL1O60688 119 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 C1orf122Q6ZSJ8 110 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 ATP5L2Q7Z4Y8 100 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 ARPC1AQ92747 370 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 YPEL2Q96QA6 119 aa8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 PDCD11Q14690 1871 aaKnown RBP8.46□□□□□ -1.06
GTF3C1-202ENST00000561623 PATJQ8NI35 1801 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 SDK2Q58EX2 2172 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 CREBBPQ92793 2442 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 PSME4Q14997 1843 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 CD24P25063 80 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 GLRXP35754 106 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 NPC2P61916 151 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 PRCDQ00LT1 54 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 CGB3P0DN86 165 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 TCF15Q12870 199 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 OR9G4Q8NGQ1 327 aa8.45□□□□□ -1.06
GTF3C1-202ENST00000561623 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 CGB7P0DN87 165 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 LYL1P12980 280 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 EXOC3-AS1Q8N2X6 119 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 RNF125Q96EQ8 232 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 ASCL4Q6XD76 172 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 PPP1R27Q86WC6 154 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 MPDZO75970 2070 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 NPIPB5A8MRT5 1133 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 H3BRM9 83 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 SPSB3Q6PJ21 355 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 CEP250Q9BV73 2442 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 LCNL1Q6ZST4 164 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 PLXNA1Q9UIW2 1896 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 LRRC37AA6NMS7 1700 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 H7C1H1 209 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 QRFPP83859 136 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 ZMAT4Q9H898 229 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 IGKV2-40A0A087WW87 121 aaPredicted RBP8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 A0A0G2JRQ6 117 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 EFNA2O43921 213 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 IGKV2D-40P01614 121 aaPredicted RBP8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 MYOD1P15172 320 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 DPM3Q9P2X0 92 aa8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
GTF3C1-202ENST00000561623 GATA4P43694 442 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 C10orf55Q5SWW7 151 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 ASCL2Q99929 193 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 LINC00312Q9Y6C7 94 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 CACNA1DQ01668 2161 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 CRYGSP22914 178 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 LINC00205P59089 165 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 SLX1AQ9BQ83 275 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 CNTFRP26992 372 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 WFDC12Q8WWY7 111 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 DUX3Q96PT4 197 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 SLC25A2Q9BXI2 301 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 TMEM14EPQ6UXP3 125 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 FAM186AA6NE01 2351 aa8.43□□□□□ -1.06
GTF3C1-202ENST00000561623 TRAV8-1A0A0A6YYK1 113 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 IGHV3-11P01762 117 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 CD7P09564 240 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 LYZL1Q6UWQ5 148 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 ADAMTSL5Q6ZMM2 481 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 MAPK1IP1LQ8NDC0 245 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 Q96MF0 132 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 SCRT1Q9BWW7 348 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 KIF26BQ2KJY2 2108 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 NTF4P34130 210 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 ZCCHC24Q8N2G6 241 aaKnown RBP8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
GTF3C1-202ENST00000561623 CACNA1EQ15878 2313 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms