RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 FRZBQ92765 325 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 PTX4Q96A99 478 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 NARS2Q96I59 477 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 ZNF251Q9BRH9 671 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 CHST6Q9GZX3 395 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 ARMC1Q9NVT9 282 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 RBFOX1Q9NWB1 397 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 RCL1Q9Y2P8 373 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 SAMHD1Q9Y3Z3 626 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 YTHDF2Q9Y5A9 579 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 NUBP2Q9Y5Y2 271 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 PLCE1Q9P212 2302 aa2.28□□□□□ -2.05
HERC1-215ENST00000561436 TENM3Q9P273 2699 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 IGKV1-27A0A075B6S5 117 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 OR5H14A6NHG9 310 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 H3BSH0 61 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 LGALS9O00182 355 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 SLC22A1O15245 554 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 ZNF688P0C7X2 276 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 PFN2P35080 140 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 BMI1P35226 326 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 RANBP1P43487 201 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 CMC4P56277 68 aaPredicted RBP2.27□□□□□ -2.05
HERC1-215ENST00000561436 CXCR4P61073 352 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 RAB11AP62491 216 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 CACNG7P62955 275 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 SYCNQ0VAF6 134 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 CDK5R1Q15078 307 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 MMDQ15546 238 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 RAB11BQ15907 218 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 C5orf64Q2M2E5 130 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 AADACL4Q5VUY2 407 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 SLC16A13Q7RTY0 426 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 GAPTQ8N292 157 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 GHSRQ92847 366 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 LINC00477Q96M19 166 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 SPACA5Q96QH8 159 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 ZNF430Q9H8G1 570 aaPredicted RBP2.27□□□□□ -2.05
HERC1-215ENST00000561436 FGFR1OP2Q9NVK5 253 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 MTFP1Q9UDX5 166 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 LINC00527Q9UJ94 153 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 JPT1Q9UK76 154 aa2.27□□□□□ -2.05
HERC1-215ENST00000561436 YLPM1P49750 1951 aaKnown RBP2.27□□□□□ -2.05
HERC1-215ENST00000561436 HERC2O95714 4834 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 LOC102724200A0A096LPH7 203 aaPredicted RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 IGKV1-9A0A0C4DH69 117 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 IGKV1-12A0A0C4DH73 117 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 LOC107986453A0A1B0GWG9 222 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 FAM223BA6NKX1 122 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 H0YJX3 145 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 C15orf65H3BRN8 121 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 DNASE2O00115 360 aaPredicted RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 SDCBPO00560 298 aaPredicted RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 BPY2O14599 106 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 GNGT2O14610 69 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 SULT1B1O43704 296 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 YPEL1O60688 119 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 SC5DO75845 299 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 SOX14O95416 240 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 FADS2O95864 444 aaKnown RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 IGKV1D-12P01611 117 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 APCSP02743 223 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 MT-ND4P03905 459 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 GTF2F2P13984 249 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 LGALS7P47929 136 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 ACTBP60709 375 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 KISS1Q15726 138 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 LINC00483Q53H64 154 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 ACTBL2Q562R1 376 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 MPV17L2Q567V2 206 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 DHFR2Q86XF0 187 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 CBLN2Q8IUK8 224 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 FAM223AQ8IWN6 122 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 ZNF439Q8NDP4 499 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 OR51A2Q8NGJ7 313 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 ARL11Q969Q4 196 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 YPEL2Q96QA6 119 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 TSNAXQ99598 290 aaKnown RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 SPIN2AQ99865 258 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 APOL4Q9BPW4 351 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 NIPSNAP1Q9BPW8 284 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 SPIN2BQ9BPZ2 258 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 HSPB9Q9BQS6 159 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 RSG1Q9BU20 258 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 GGTLC1Q9BX51 225 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 METTL9Q9H1A3 318 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 PARP11Q9NR21 331 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 PEF1Q9UBV8 284 aaKnown RBP2.26□□□□□ -2.05
HERC1-215ENST00000561436 V9GYQ6 96 aa2.26□□□□□ -2.05
HERC1-215ENST00000561436 PRR14LQ5THK1 2151 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 IGHV3OR16-9A0A0B4J2B5 98 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 A0A0U1RQV1 116 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 A0A1W2PQL4 384 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 C7orf66A4D0T2 115 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 TMEM212A6NML5 194 aa2.25□□□□□ -2.05
HERC1-215ENST00000561436 ZNF705GA8MUZ8 300 aaPredicted RBP2.25□□□□□ -2.05
HERC1-215ENST00000561436 OR11H12B2RN74 326 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms