RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IGKV1-6A0A0C4DH72 117 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 C9orf170A2RU37 121 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 E9PI62 339 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 K7EQG2 157 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 EI24O14681 340 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 MYL12BO14950 172 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 EIF3GO75821 320 aaKnown RBP eCLIP3.62□□□□□ -1.83
HERC1-213ENST00000561359 APOHP02749 345 aaPredicted RBP3.62□□□□□ -1.83
HERC1-213ENST00000561359 CTSGP08311 255 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 CD3GP09693 182 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 HLA-GP17693 338 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 MYL12AP19105 171 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 DAPP51397 102 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 UCP3P55916 312 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 FXYD7P58549 80 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 CDNFQ49AH0 187 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 PSMG4Q5JS54 123 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 DNLZQ5SXM8 178 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 ZNF114Q8NC26 417 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 TMEM167AQ8TBQ9 72 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 FCGR1BQ92637 280 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 RPL36ALQ969Q0 106 aaKnown RBP3.62□□□□□ -1.83
HERC1-213ENST00000561359 DAZAP1Q96EP5 407 aaKnown RBP3.62□□□□□ -1.83
HERC1-213ENST00000561359 ATP6V0BQ99437 205 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 C7orf50Q9BRJ6 194 aaKnown RBP3.62□□□□□ -1.83
HERC1-213ENST00000561359 C2orf88Q9BSF0 95 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 UPK3BQ9BT76 320 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 VSIRQ9H7M9 311 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 NIT2Q9NQR4 276 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 PLEKHJ1Q9NW61 149 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 EXOGQ9Y2C4 368 aaKnown RBP3.62□□□□□ -1.83
HERC1-213ENST00000561359 TPRKBQ9Y3C4 175 aa3.62□□□□□ -1.83
HERC1-213ENST00000561359 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 TRBV6-6A0A0A6YYG2 114 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 A0A0B4J293 547 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 IGLC7A0M8Q6 106 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 HELTA6NFD8 242 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 H3BMM0 161 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 RS1O15537 224 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 LALBAP00709 142 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 IGKV3-20P01619 116 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 HLA-DQB1P01920 261 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 RLN2P04090 185 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 ATP5G1P05496 136 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 CD36P16671 472 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 ATP5G3P48201 142 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 NCS1P62166 190 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 CFAP161Q6P656 301 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 KCTD9Q7L273 389 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 NFE4Q86UQ8 179 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
HERC1-213ENST00000561359 C12orf45Q8N5I9 185 aaPredicted RBP3.61□□□□□ -1.83
HERC1-213ENST00000561359 ZNF555Q8NEP9 628 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 OR8J1Q8NGP2 316 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 OR4S2Q8NH73 311 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 OR10J5Q8NHC4 309 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 ZNF431Q8TF32 576 aaPredicted RBP3.61□□□□□ -1.83
HERC1-213ENST00000561359 GLYATL2Q8WU03 294 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 CANT1Q8WVQ1 401 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 Q96MT0 163 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 QTRT1Q9BXR0 403 aaKnown RBP3.61□□□□□ -1.83
HERC1-213ENST00000561359 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 HRASLSQ9HDD0 168 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 AK3Q9UIJ7 227 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 MRPS16Q9Y3D3 137 aaKnown RBP3.61□□□□□ -1.83
HERC1-213ENST00000561359 GOLT1BQ9Y3E0 138 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 ALG5Q9Y673 324 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 TNXBP22105 4242 aa3.61□□□□□ -1.83
HERC1-213ENST00000561359 TRAV8-7A0A075B6U6 113 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 A0A1B0GV90 55 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 A0A1W2PS18 150 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 LYRM9A8MSI8 78 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 TRDCB7Z8K6 153 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 J3QRE1 110 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 CIDEAO60543 219 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 OR13C7P0DN81 318 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 HOXB6P17509 224 aaKnown RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 IGFBP3P17936 291 aaPredicted RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 SRMP19623 302 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 HTR2CP28335 458 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SNRPD3P62318 126 aaKnown RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 DHRS2Q13268 280 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SMCO1Q147U7 214 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 ESRGQ1W209 222 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 ZIK1Q3SY52 487 aaPredicted RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 MORN5Q5VZ52 161 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 OR10K2Q6IF99 312 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 MZT2BQ6NZ67 158 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SYS1Q8N2H4 156 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 SLC24A4Q8NFF2 622 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 OR10W1Q8NGF6 305 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 OR4A4PQ8NGN8 299 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 GNPNAT1Q96EK6 184 aaPredicted RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 PFDN5Q99471 154 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 GINS4Q9BRT9 223 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 MARVELD1Q9BSK0 173 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 TMEM59Q9BXS4 323 aa3.6□□□□□ -1.83
HERC1-213ENST00000561359 NKX6-2Q9C056 277 aaPredicted RBP3.6□□□□□ -1.83
HERC1-213ENST00000561359 COMMD5Q9GZQ3 224 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms