RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 THAP8Q8NA92 274 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 SLC35E1Q96K37 410 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 SPAG8Q99932 426 aaPredicted RBP10.34□□□□□ -0.75
TPM1-230ENST00000561266 GINS3Q9BRX5 216 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 SRD5A3Q9H8P0 318 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 LSM5Q9Y4Y9 91 aaKnown RBP10.34□□□□□ -0.75
TPM1-230ENST00000561266 NBEAL2Q6ZNJ1 2754 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 IL4P05112 153 aa10.33□□□□□ -0.76
TPM1-230ENST00000561266 GATA2P23769 480 aaPredicted RBP10.33□□□□□ -0.76
TPM1-230ENST00000561266 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
TPM1-230ENST00000561266 Q8WTZ3 238 aa10.33□□□□□ -0.76
TPM1-230ENST00000561266 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
TPM1-230ENST00000561266 TUBA4BQ9H853 241 aa10.33□□□□□ -0.76
TPM1-230ENST00000561266 ZFP92A6NM28 416 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 NHLRC4P0CG21 123 aaPredicted RBP10.32□□□□□ -0.76
TPM1-230ENST00000561266 P2RY1P47900 373 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
TPM1-230ENST00000561266 RAB32Q13637 225 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 LAMTOR1Q6IAA8 161 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 C16orf54Q6UWD8 224 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 WFDC3Q8IUB2 231 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 METTL26Q96S19 204 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 RAB40CQ96S21 281 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 TRGV9Q99603 122 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 RETNQ9HD89 108 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 STAB2Q8WWQ8 2551 aa10.32□□□□□ -0.76
TPM1-230ENST00000561266 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 SNRPGP15A8MWD9 76 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 TSC22D2O75157 780 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 HNRNPCP07910 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM1-230ENST00000561266 TAS2R30P59541 319 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 DEFA1P59665 94 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 DEFA3P59666 94 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 RPP30P78346 268 aaKnown RBP10.31□□□□□ -0.76
TPM1-230ENST00000561266 APRG1Q8IVJ8 170 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 RNF125Q96EQ8 232 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 U3KQK5 164 aa10.31□□□□□ -0.76
TPM1-230ENST00000561266 GOSR2O14653 212 aa10.3□□□□□ -0.76
TPM1-230ENST00000561266 BUB3O43684 328 aa10.3□□□□□ -0.76
TPM1-230ENST00000561266 H2BFSP57053 126 aa10.3□□□□□ -0.76
TPM1-230ENST00000561266 TMEM144Q7Z5S9 345 aa10.3□□□□□ -0.76
TPM1-230ENST00000561266 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
TPM1-230ENST00000561266 GPN1Q9HCN4 374 aaPredicted RBP10.3□□□□□ -0.76
TPM1-230ENST00000561266 IGSF23A1L1A6 192 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 H0YIZ8 118 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 PRAF2O60831 178 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 SCGB2A1O75556 95 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 S100A10P60903 97 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 LYZP61626 148 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 DLK1P80370 383 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 RCHY1Q96PM5 261 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
TPM1-230ENST00000561266 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 K7EQG2 157 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 CST7O76096 145 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
TPM1-230ENST00000561266 AKR1C1Q04828 323 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 C17orf77Q96MU5 243 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 FAM110AQ9BQ89 295 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 RABAC1Q9UI14 185 aa10.28□□□□□ -0.76
TPM1-230ENST00000561266 A0A1W2PS18 150 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 L7N2F9 121 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 EIF2B2P49770 351 aaKnown RBP10.27□□□□□ -0.77
TPM1-230ENST00000561266 BCAP31P51572 246 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 VAMP2P63027 116 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 CYP2G1PQ6ZSU1 146 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 STXBP6Q8NFX7 210 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 OR5AC2Q9NZP5 309 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 ALG5Q9Y673 324 aa10.27□□□□□ -0.77
TPM1-230ENST00000561266 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 DNASE2O00115 360 aaPredicted RBP10.26□□□□□ -0.77
TPM1-230ENST00000561266 DEDDO75618 318 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
TPM1-230ENST00000561266 CAV2P51636 162 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 DEFB131AP59861 70 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 SLC38A11Q08AI6 406 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 LEMD1Q68G75 181 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 NMES1Q9C002 83 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 TMEM231Q9H6L2 316 aa10.26□□□□□ -0.77
TPM1-230ENST00000561266 LYRM2Q9NU23 88 aaPredicted RBP10.26□□□□□ -0.77
TPM1-230ENST00000561266 LOC102724200A0A096LPH7 203 aaPredicted RBP10.25□□□□□ -0.77
TPM1-230ENST00000561266 FNDC10F2Z333 226 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 ZNF688P0C7X2 276 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 CXCL3P19876 107 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 BMI1P35226 326 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 NHLH2Q02577 135 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 LRRC37A5PQ49AS3 106 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 SIGLEC15Q6ZMC9 328 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 MGST2Q99735 147 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
TPM1-230ENST00000561266 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms