RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 PBDC1Q9BVG4 233 aa9.25□□□□□ -0.93
CHRNA3-208ENST00000561128 PAIP2BQ9ULR5 123 aaKnown RBP9.25□□□□□ -0.93
CHRNA3-208ENST00000561128 TMED3Q9Y3Q3 217 aa9.25□□□□□ -0.93
CHRNA3-208ENST00000561128 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
CHRNA3-208ENST00000561128 LYSTQ99698 3801 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 NAP1L6A6NFF2 107 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 ZFP92A6NM28 416 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 FAM90A26D6RGX4 464 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 UBE2CO00762 179 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 CCSO14618 274 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 DEFB4AO15263 64 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 BUB3O43684 328 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 BMI1P35226 326 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 INPP1P49441 399 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 PAX9P55771 341 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 LYZP61626 148 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 ETFRF1Q6IPR1 90 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 ACOT7LQ6ZUV0 252 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 THAP8Q8NA92 274 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 SLC35E1Q96K37 410 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 CSTL1Q9H114 145 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 C20orf85Q9H1P6 137 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 TMEM231Q9H6L2 316 aa9.24□□□□□ -0.93
CHRNA3-208ENST00000561128 A0A1W2PS18 150 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 PMS2P5A8MQ11 134 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 GPX4P36969 197 aaPredicted RBP9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 ID3Q02535 119 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 SPANXN5Q5MJ07 72 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 GRAMD2BQ96HH9 432 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 RCL1Q9Y2P8 373 aaKnown RBP9.23□□□□□ -0.93
CHRNA3-208ENST00000561128 SOCS3O14543 225 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 LYRM1O43325 122 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 SSSCA1O60232 199 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 EIF2B2P49770 351 aaKnown RBP9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 SIGLEC15Q6ZMC9 328 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 NOXA1Q86UR1 476 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 TRGV9Q99603 122 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 CLEC5AQ9NY25 188 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 CACFD1Q9UGQ2 172 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 TBC1D24Q9ULP9 559 aa9.22□□□□□ -0.93
CHRNA3-208ENST00000561128 HELTA6NFD8 242 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 SCGB2A1O75556 95 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 CD5P06127 495 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 ARL16Q0P5N6 197 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 C4orf46Q504U0 113 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 OR11H2Q8NH07 326 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 C7orf50Q9BRJ6 194 aaKnown RBP9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 NRN1Q9NPD7 142 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.94
CHRNA3-208ENST00000561128 TRAV6A0A075B6T7 132 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 MED6O75586 246 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 SCGB1D2O95969 90 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 RBMY1A1P0DJD3 496 aaKnown RBP9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 RBMY1CP0DJD4 496 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 RBMY1FQ15415 496 aaKnown RBP9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 IAH1Q2TAA2 248 aaPredicted RBP9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 CNPY1Q3B7I2 92 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 STHQ8IWL8 128 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 ZBTB8BQ8NAP8 495 aaPredicted RBP9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 Q8NAQ8 132 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 COQ8AQ8NI60 647 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 MITD1Q8WV92 249 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 NARS2Q96I59 477 aaKnown RBP9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 RAB40CQ96S21 281 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 RARRES2Q99969 163 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 SLC25A32Q9H2D1 315 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 NUDT15Q9NV35 164 aa9.2□□□□□ -0.94
CHRNA3-208ENST00000561128 MBPP02686 304 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 TCRBP04435 133 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 METTL15P1P0C7V9 234 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 PRB4P10163 310 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 NKX2-1P43699 371 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 NANOS2P60321 138 aaKnown RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 RRAS2P62070 204 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 RAB11AP62491 216 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 OR8G2PQ6IF36 304 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 CSNK1G2-AS1Q8NCQ2 148 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 GATAD1Q8WUU5 269 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 CIB3Q96Q77 187 aaPredicted RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 C11orf1Q9H5F2 150 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 PSENENQ9NZ42 101 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 NDUFA13Q9P0J0 144 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 STRAPQ9Y3F4 350 aaKnown RBP9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 X6R8D5 127 aa9.19□□□□□ -0.94
CHRNA3-208ENST00000561128 IGHV4-28A0A0C4DH34 117 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 A6NHS1 94 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms