RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 FAM223AQ8IWN6 122 aa17.32■□□□□ 0.36
SNX22-205ENST00000560945 OR1B1Q8NGR6 318 aa17.32■□□□□ 0.36
SNX22-205ENST00000560945 SCRT1Q9BWW7 348 aa17.32■□□□□ 0.36
SNX22-205ENST00000560945 TRAV1-1A0A0B4J248 108 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 COX7A2P2O60397 106 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 IGHG4P01861 327 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 OR5G3P0C626 314 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 RD3LP0DJH9 198 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 FCGR2BP31994 310 aaPredicted RBP17.31■□□□□ 0.36
SNX22-205ENST00000560945 RAB9AP51151 201 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 LYZP61626 148 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 TRAV5A0A0B4J249 113 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 BRI3O95415 125 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 TOMM40O96008 361 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 TRBV12-3P01733 135 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 PSMB8P28062 276 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 HILS1P60008 231 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 RHOBP62745 196 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 ZNF418Q8TF45 676 aaPredicted RBP17.31■□□□□ 0.36
SNX22-205ENST00000560945 TXN2Q99757 166 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 DNAJC4Q9NNZ3 241 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 FUT9Q9Y231 359 aa17.31■□□□□ 0.36
SNX22-205ENST00000560945 MAST4O15021 2626 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 MTORP42345 2549 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 TRAV30A0A087WSZ9 112 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 PPP5D1E7EU14 171 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 CLDN34H7C241 214 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 HBE1P02100 147 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 OR51G1Q8NGK1 321 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 GATAD1Q8WUU5 269 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 RARRES2Q99969 163 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 PBDC1Q9BVG4 233 aa17.3■□□□□ 0.36
SNX22-205ENST00000560945 RNASE1P07998 156 aaKnown RBP17.29■□□□□ 0.36
SNX22-205ENST00000560945 YPEL3P61236 119 aaPredicted RBP17.29■□□□□ 0.36
SNX22-205ENST00000560945 SRSF2Q01130 221 aaKnown RBP17.29■□□□□ 0.36
SNX22-205ENST00000560945 HAGHQ16775 308 aa17.29■□□□□ 0.36
SNX22-205ENST00000560945 TOR2AQ5JU69 321 aa17.29■□□□□ 0.36
SNX22-205ENST00000560945 C10orf113Q5VZT2 155 aa17.29■□□□□ 0.36
SNX22-205ENST00000560945 IQCF2Q8IXL9 164 aa17.29■□□□□ 0.36
SNX22-205ENST00000560945 TRBV7-1A0A0A6YYK4 115 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 RAB19A4D1S5 217 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 C9JQL5 133 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 STAG3L2P0CL84 134 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 STAG3L3P0CL85 134 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 ARL14EPLP0DKL9 152 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 ZNF491Q8N8L2 437 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 GNG13Q9P2W3 67 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 NSD1Q96L73 2696 aaPredicted RBP17.28■□□□□ 0.36
SNX22-205ENST00000560945 IGHV3OR16-8A0A075B7F1 116 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 IL4P05112 153 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 PLP1P60201 277 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 KIAA0141Q14154 515 aaPredicted RBP17.28■□□□□ 0.36
SNX22-205ENST00000560945 EIF4E3Q8N5X7 224 aaKnown RBP17.28■□□□□ 0.36
SNX22-205ENST00000560945 ZNF503Q96F45 646 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 OR5B12Q96R08 314 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 GNB4Q9HAV0 340 aa17.28■□□□□ 0.36
SNX22-205ENST00000560945 TGOLN2O43493 480 aa17.27■□□□□ 0.36
SNX22-205ENST00000560945 RPLP1P05386 114 aaKnown RBP17.27■□□□□ 0.36
SNX22-205ENST00000560945 USF2Q15853 346 aaPredicted RBP17.27■□□□□ 0.36
SNX22-205ENST00000560945 GUK1Q16774 197 aa17.27■□□□□ 0.36
SNX22-205ENST00000560945 HIST2H2BDQ6DRA6 164 aa17.27■□□□□ 0.36
SNX22-205ENST00000560945 LINC00305Q7Z4B0 112 aa17.27■□□□□ 0.36
SNX22-205ENST00000560945 OR1L4Q8NGR5 311 aa17.27■□□□□ 0.36
SNX22-205ENST00000560945 WI2-2373I1.2A0A1W2PRP0 233 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 NUPL2O15504 423 aaKnown RBP17.26■□□□□ 0.35
SNX22-205ENST00000560945 HYPMO75409 117 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 LEMD1Q68G75 181 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 USMG5Q96IX5 58 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 PFDN5Q99471 154 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 SLC25A2Q9BXI2 301 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 PUS1Q9Y606 427 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX22-205ENST00000560945 NUDT19A8MXV4 375 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 I3L521 148 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 COMMD1Q8N668 190 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 RNF125Q96EQ8 232 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 FAM167A-AS1Q96KT0 104 aa17.26■□□□□ 0.35
SNX22-205ENST00000560945 ANKRD34BA5PLL1 514 aa17.25■□□□□ 0.35
SNX22-205ENST00000560945 FABP1P07148 127 aa17.25■□□□□ 0.35
SNX22-205ENST00000560945 Q8WTZ3 238 aa17.25■□□□□ 0.35
SNX22-205ENST00000560945 C19orf24Q9BVV8 132 aa17.25■□□□□ 0.35
SNX22-205ENST00000560945 EIF5A2Q9GZV4 153 aaKnown RBP17.25■□□□□ 0.35
SNX22-205ENST00000560945 TREM1Q9NP99 234 aa17.25■□□□□ 0.35
SNX22-205ENST00000560945 MRPL27Q9P0M9 148 aaKnown RBP17.25■□□□□ 0.35
SNX22-205ENST00000560945 RBFOX3A6NFN3 312 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 SLC35B1P78383 322 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 TEX38Q6PEX7 206 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 OR4X2Q8NGF9 303 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 MRPL32Q9BYC8 188 aaKnown RBP17.24■□□□□ 0.35
SNX22-205ENST00000560945 HIGD1AQ9Y241 93 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 FN1P02751 2386 aaKnown RBP17.24■□□□□ 0.35
SNX22-205ENST00000560945 ELOA3CA0A087WX78 387 aaPredicted RBP17.24■□□□□ 0.35
SNX22-205ENST00000560945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.24■□□□□ 0.35
SNX22-205ENST00000560945 CRLF1O75462 422 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 OR2C1O95371 312 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 CD5P06127 495 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 C8orf88P0DMB2 117 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 LINC00052Q96N35 136 aa17.24■□□□□ 0.35
SNX22-205ENST00000560945 TECRQ9NZ01 308 aaKnown RBP17.24■□□□□ 0.35
SNX22-205ENST00000560945 CXorf1O96002 111 aa17.23■□□□□ 0.35
SNX22-205ENST00000560945 GCHFRP30047 84 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms