RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 TEX36Q5VZQ5 186 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 PVRIGQ6DKI7 326 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 C19orf35Q6ZS72 473 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 Q6ZSV7 163 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 SLC25A48Q6ZT89 311 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF833PQ6ZTB9 187 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 MIR17HGQ75NE6 70 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 VASH2Q86V25 355 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 LRP11Q86VZ4 500 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 DOLPP1Q86YN1 238 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 VKORC1L1Q8N0U8 176 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 OR8I2Q8N0Y5 310 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 C8orf31Q8N9H6 132 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 THAP8Q8NA92 274 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 OR5T1Q8NG75 326 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 OR4P4Q8NGL7 312 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 CT45A3Q8NHU0 189 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 RFESDQ8TAC1 157 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF596Q8TC21 504 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 C18orf32Q8TCD1 76 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 CACNG8Q8WXS5 425 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TMEM190Q8WZ59 177 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 RCHY1Q96PM5 261 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 GAFA1Q96PS6 74 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 HSPB9Q9BQS6 159 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TMEM208Q9BTX3 173 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 SLC25A2Q9BXI2 301 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 DEFB127Q9H1M4 99 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 PLEKHA3Q9HB20 300 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF71Q9NQZ8 489 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 SLC35D1Q9NTN3 355 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TECRQ9NZ01 308 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 IL19Q9UHD0 177 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 RPUSD1Q9UJJ7 312 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 TBL2Q9Y4P3 447 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 KNTC1P50748 2209 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 FAM186AA6NE01 2351 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TRIOBPQ9H2D6 2365 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 PLCE1Q9P212 2302 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TRIOO75962 3097 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 XIRP2A4UGR9 3374 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 CADP27708 2225 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ARFGEF3Q5TH69 2177 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IGKV1D-37A0A075B6S9 117 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IGHV2-26A0A0B4J1V2 119 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 TRAV17A0A0B4J275 112 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IGHV1-69-2A0A0G2JMI3 117 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IGHV3-64DA0A0J9YX35 117 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 A0A1W2PN81 502 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 A0A1W2PS18 150 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 TCRBV4S1A1TA0A5B7 111 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 C19orf71A6NCJ1 209 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 HELTA6NFD8 242 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 H0YJW9 148 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 J3QR06 171 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 PEX7O00628 323 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CDX4O14627 284 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR7C2O60412 319 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 HYPMO75409 117 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 FOXH1O75593 365 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CEACAM4O75871 244 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 FRMD6-AS1P0C7T7 363 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 C3orf79P0CE67 100 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CT45A6P0DMU7 189 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CT45A5P0DMU8 189 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CT45A7P0DMV0 189 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 MYOD1P15172 320 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNF25P17030 456 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 HNF1AP20823 631 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 USF1P22415 310 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 COL8A2P25067 703 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CRYBB3P26998 211 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 G0S2P27469 103 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SRIP30626 198 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 GLRXP35754 106 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CA7P43166 264 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 AMTP48728 403 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNF83P51522 516 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CASP6P55212 293 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 KLF3P57682 345 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 BPIFB3P59826 476 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 UBE2L3P68036 154 aaKnown RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 SLAQ13239 276 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 OR5I1Q13606 314 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 PMCHL1Q16048 86 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 LTC4SQ16873 150 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 TDRG1Q3Y452 100 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SPATA45Q537H7 98 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 SPRNQ5BIV9 151 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 TIMM23BQ5SRD1 257 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 COL5A1-AS1Q5SY13 56 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 FAM120AOSQ5T036 256 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 IBA57Q5T440 356 aaKnown RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 ATP1A1-AS1Q5TC04 95 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 HES3Q5TGS1 186 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 CYB5R2Q6BCY4 276 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 C16orf54Q6UWD8 224 aa1.95□□□□□ -2.1
SPG11-223ENST00000560858 ZNF705AQ6ZN79 300 aaPredicted RBP1.95□□□□□ -2.1
SPG11-223ENST00000560858 BHLHA15Q7RTS1 189 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms