RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 COTL1Q14019 142 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
AP4E1-203ENST00000560508 STHQ8IWL8 128 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 ZNF524Q96C55 264 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 NRN1Q9NPD7 142 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 YAE1D1Q9NRH1 226 aa5.67□□□□□ -1.5
AP4E1-203ENST00000560508 HEATR5AQ86XA9 2040 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 TRBV24-1A0A075B6N3 115 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 COLCA2A8K830 154 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 WISP1O95388 367 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 CXCL1P09341 107 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SIGLEC9Q9Y336 463 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 ADAMTS9Q9P2N4 1935 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 IGHV3OR16-8A0A075B7F1 116 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 MUC21A0A0G2JKD1 596 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 A0A0G2JRQ6 117 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 MUC21A0A140T8X8 626 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 LINC00614P0C842 121 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 MUC21Q5SSG8 566 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 FAM19A2Q8N3H0 131 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SMIM12Q96EX1 92 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 PSG1P11464 419 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 GATA4P43694 442 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 ZNF833PQ6ZTB9 187 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 BEND2Q8NDZ0 799 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 NEUROG1Q92886 237 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SCRT1Q9BWW7 348 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 PEF1Q9UBV8 284 aaKnown RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SNRNP200O75643 2136 aaKnown RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 H3BRM9 83 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 K7ERU9 68 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 PPBPP02775 128 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 CD7P09564 240 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 COL8A2P25067 703 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 UNQ6494/PRO21346Q6UXR6 183 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 PHF3Q92576 2039 aaKnown RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 CEP192Q8TEP8 1941 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 MPDZO75970 2070 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 C5orf64Q2M2E5 130 aa5.66□□□□□ -1.5
AP4E1-203ENST00000560508 NXT2Q9NPJ8 142 aaKnown RBP5.66□□□□□ -1.5
AP4E1-203ENST00000560508 OR11H12B2RN74 326 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 RNASE2P10153 161 aaKnown RBP5.65□□□□□ -1.5
AP4E1-203ENST00000560508 PLP1P60201 277 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 MEIG1Q5JSS6 88 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 TMEM170BQ5T4T1 132 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 ZNF329Q86UD4 541 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 LYPD1Q8N2G4 141 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 OR11H1Q8NG94 326 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 OR11H2Q8NH07 326 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 IGKV2-40A0A087WW87 121 aaPredicted RBP5.65□□□□□ -1.5
AP4E1-203ENST00000560508 PGPEP1LA6NFU8 196 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 IGKV2D-40P01614 121 aaPredicted RBP5.65□□□□□ -1.5
AP4E1-203ENST00000560508 C10orf55Q5SWW7 151 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 NIT1Q86X76 327 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 DOCK8Q8NF50 2099 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 A0A1W2PRX2 142 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 NDUFA3O95167 84 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 C15orf32Q32M92 178 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 ZNF418Q8TF45 676 aaPredicted RBP5.65□□□□□ -1.5
AP4E1-203ENST00000560508 GLMPQ8WWB7 406 aa5.65□□□□□ -1.5
AP4E1-203ENST00000560508 SEPSECSQ9HD40 501 aaKnown RBP5.65□□□□□ -1.5
AP4E1-203ENST00000560508 IGKV1-6A0A0C4DH72 117 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 HBDP02042 147 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 PSG3Q16557 428 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 ZNF585BQ52M93 769 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 LINC01551Q86U37 167 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 RPP25LQ8N5L8 163 aaKnown RBP5.65□□□□□ -1.51
AP4E1-203ENST00000560508 TMEM14BQ9NUH8 114 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 NCKAP5O14513 1909 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 TMEM50AO95807 157 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 C14orf144Q96I85 54 aa5.65□□□□□ -1.51
AP4E1-203ENST00000560508 PSMB11A5LHX3 300 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 IGLV1-44P01699 117 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 PRSS2P07478 247 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 USMG5Q96IX5 58 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 HS3ST6Q96QI5 342 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 CRIM1Q9NZV1 1036 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 RFNGQ9Y644 331 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 MUC22E2RYF6 1773 aaPredicted RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 PMS2P5A8MQ11 134 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 TMEM262E9PQX1 116 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 TNFSF13O75888 250 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 C1orf147Q96MC9 270 aaPredicted RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 A0A1B0GV90 55 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms