RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 REG1AP05451 166 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 NBEAP1P0C6P0 100 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 ESDP10768 282 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 GP9P14770 177 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 FCGR2BP31994 310 aaPredicted RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 CX3CL1P78423 397 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 JOSD1Q15040 202 aaPredicted RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 CT83Q5H943 113 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 PYY3Q5JQD4 70 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 XP32Q5T750 250 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 ARL6IP6Q8N6S5 226 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 OR1B1Q8NGR6 318 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 ITLN2Q8WWU7 325 aaPredicted RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 FMC1Q96HJ9 113 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 ATG101Q9BSB4 218 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 SIRPDQ9H106 197 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 OTORQ9NRC9 128 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 THYN1Q9P016 225 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 EPDR1Q9UM22 224 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.18
RTF1-206ENST00000560447 NAV3Q8IVL0 2385 aa7.71□□□□□ -1.18
RTF1-206ENST00000560447 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 TRAV5A0A0B4J249 113 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 IGHV2-70DA0A0C4DH43 119 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 HLA-DQA1P01909 254 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 HIST1H1EP10412 219 aaKnown RBP7.7□□□□□ -1.18
RTF1-206ENST00000560447 FABP4P15090 132 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 HIST1H1BP16401 226 aaKnown RBP7.7□□□□□ -1.18
RTF1-206ENST00000560447 ORM2P19652 201 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 UBE2E1P51965 193 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 CTAG1AP78358 180 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 Q0VG73 95 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 FXYD3Q14802 87 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 MORN5Q5VZ52 161 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 VMO1Q7Z5L0 202 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 TTC9CQ8N5M4 171 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 WIPF2Q8TF74 440 aaPredicted RBP7.7□□□□□ -1.18
RTF1-206ENST00000560447 MBD6Q96DN6 1003 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 GRAMD2BQ96HH9 432 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 TXN2Q99757 166 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 LPAR2Q9HBW0 351 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
RTF1-206ENST00000560447 ZNF492Q9P255 531 aa7.7□□□□□ -1.18
RTF1-206ENST00000560447 IZUMO1RA6ND01 250 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 K7EIM0 57 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 GATCO43716 136 aaKnown RBP7.69□□□□□ -1.18
RTF1-206ENST00000560447 AMBPP02760 352 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 SLC25A5P05141 298 aaKnown RBP7.69□□□□□ -1.18
RTF1-206ENST00000560447 RD3LP0DJH9 198 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 PYYP10082 97 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 PSG1P11464 419 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 BRS3P32247 399 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 UBE2G1P62253 170 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 PAFAH1B2P68402 229 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 LDLRAD2Q5SZI1 272 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 GFI1BQ5VTD9 330 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 ATP5L2Q7Z4Y8 100 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 BAGE2Q86Y30 109 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 GBGT1Q8N5D6 347 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 GPR82Q96P67 336 aa7.69□□□□□ -1.18
RTF1-206ENST00000560447 SOX21Q9Y651 276 aaPredicted RBP7.69□□□□□ -1.18
RTF1-206ENST00000560447 IGLV11-55A0A075B6I3 123 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 SERTM2A0A1B0GWG4 89 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 WI2-2373I1.2A0A1W2PRP0 233 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 FAM231BA6NCW3 169 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 PGPA6NDG6 321 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 FBLL1A6NHQ2 334 aaKnown RBP7.68□□□□□ -1.18
RTF1-206ENST00000560447 H3BRN7 92 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 OVOL3O00110 214 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 SLC17A3O00476 420 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 FCN1O00602 326 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 IGKV1-17P01599 117 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 HLA-DRB1P01911 266 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 AMY1AP04745 511 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 MFAP4P55083 255 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 RANP62826 216 aaKnown RBP7.68□□□□□ -1.18
RTF1-206ENST00000560447 PDE6HQ13956 83 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 CLEC12BQ2HXU8 276 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 ARPC1AQ92747 370 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 ATP6V0BQ99437 205 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 SHANK2-AS3Q9BTD1 123 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 SLC25A39Q9BZJ4 359 aaPredicted RBP7.68□□□□□ -1.18
RTF1-206ENST00000560447 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
RTF1-206ENST00000560447 HILPDAQ9Y5L2 63 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 NBEAQ8NFP9 2946 aa7.68□□□□□ -1.18
RTF1-206ENST00000560447 SPTBN2O15020 2390 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
RTF1-206ENST00000560447 LTAP01374 205 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 TCRAP04437 139 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 FAM106CPP0CH98 169 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 MGST1P10620 155 aaKnown RBP7.67□□□□□ -1.18
RTF1-206ENST00000560447 CRISP2P16562 243 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 HNF1AP20823 631 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 ADMP35318 185 aa7.67□□□□□ -1.18
RTF1-206ENST00000560447 LYZP61626 148 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms