RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 LYZL2Q7Z4W2 148 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 CCDC190Q86UF4 302 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 TRIM63Q969Q1 353 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 RBKSQ9H477 322 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 MRPL36Q9P0J6 103 aaKnown RBP10.34□□□□□ -0.75
TPM1-223ENST00000560445 TMED3Q9Y3Q3 217 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 U3KQE9 123 aa10.34□□□□□ -0.75
TPM1-223ENST00000560445 NXPH3O95157 252 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 ZNF688P0C7X2 276 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 MIFP14174 115 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 SUPT4H1P63272 117 aaKnown RBP10.33□□□□□ -0.76
TPM1-223ENST00000560445 ZNF124Q15973 351 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 MLANAQ16655 118 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 TRIQKQ629K1 86 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
TPM1-223ENST00000560445 LILRB2Q8N423 598 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 LRTM2Q8N967 370 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 DCANP1Q8TF63 244 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
TPM1-223ENST00000560445 GLMPQ8WWB7 406 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
TPM1-223ENST00000560445 RBM38Q9H0Z9 239 aaKnown RBP10.33□□□□□ -0.76
TPM1-223ENST00000560445 NAP1L6A6NFF2 107 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 CENPXA8MT69 81 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 C11orf94C9JXX5 98 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 LY6G6CO95867 125 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 ID1P41134 155 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 ZNF79Q15937 498 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 C1orf194Q5T5A4 169 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 PRR13Q9NZ81 148 aa10.32□□□□□ -0.76
TPM1-223ENST00000560445 SNRPGP15A8MWD9 76 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 BUB3O43684 328 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 PSG1P11464 419 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 PSMG4Q5JS54 123 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 ACTL10Q5JWF8 245 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 PPP1R14BQ96C90 147 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 LYSTQ99698 3801 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 NDUFA13Q9P0J0 144 aa10.31□□□□□ -0.76
TPM1-223ENST00000560445 SFT2D2O95562 160 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
TPM1-223ENST00000560445 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 S100A7AQ86SG5 101 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 TMEM170AQ8WVE7 144 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 SACSQ9NZJ4 4579 aa10.3□□□□□ -0.76
TPM1-223ENST00000560445 PITX3O75364 302 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
TPM1-223ENST00000560445 MEOX2P50222 304 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 GAMTQ14353 236 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 CNPY1Q3B7I2 92 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 FAM24BQ8N5W8 94 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 COQ8AQ8NI60 647 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 C2CD4CQ8TF44 421 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 TRGV9Q99603 122 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 SRRQ9GZT4 340 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 TBC1D24Q9ULP9 559 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 PAIP2BQ9ULR5 123 aaKnown RBP10.29□□□□□ -0.76
TPM1-223ENST00000560445 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
TPM1-223ENST00000560445 WRBO00258 174 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 SYNGR2O43760 224 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 IFNA21P01568 189 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 PSMB3P49720 205 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM1-223ENST00000560445 PPP1R1AQ13522 171 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 RAB40CQ96S21 281 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 RNF24Q9Y225 148 aa10.28□□□□□ -0.76
TPM1-223ENST00000560445 KNCNA6PVL3 124 aa10.27□□□□□ -0.77
TPM1-223ENST00000560445 ZNF705EA8MWA4 302 aaPredicted RBP10.27□□□□□ -0.77
TPM1-223ENST00000560445 LYZP61626 148 aa10.27□□□□□ -0.77
TPM1-223ENST00000560445 LGALS9CQ6DKI2 356 aa10.27□□□□□ -0.77
TPM1-223ENST00000560445 OR8I2Q8N0Y5 310 aa10.27□□□□□ -0.77
TPM1-223ENST00000560445 GPR82Q96P67 336 aa10.27□□□□□ -0.77
TPM1-223ENST00000560445 C7orf50Q9BRJ6 194 aaKnown RBP10.27□□□□□ -0.77
TPM1-223ENST00000560445 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
TPM1-223ENST00000560445 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 ISLRO14498 428 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 HOXB5P09067 269 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 IAPPP10997 89 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 GALR1P47211 349 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 NANOS2P60321 138 aaKnown RBP10.26□□□□□ -0.77
TPM1-223ENST00000560445 AKR1C1Q04828 323 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 Q8NAQ8 132 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
TPM1-223ENST00000560445 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 LINC00854A0A1B0GVQ3 168 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 TMEM189A5PLL7 270 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 NDUFB6O95139 128 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 BAK1Q16611 211 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 EBLN2Q6P2I7 272 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 DNAH1Q9P2D7 4330 aa10.25□□□□□ -0.77
TPM1-223ENST00000560445 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms