RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 FABP1P07148 127 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 RD3LP0DJH9 198 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 PSG1P11464 419 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 GPR183P32249 361 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 BLOC1S1P78537 153 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF616Q08AN1 781 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF726P1Q15940 193 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 PXDC1Q5TGL8 231 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF343Q6P1L6 599 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 CLEC19AQ6UXS0 136 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 Q6ZRG5 221 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 COMMD1Q8N668 190 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 KLHDC1Q8N7A1 406 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF491Q8N8L2 437 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 OR5AU1Q8NGC0 362 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 OR10G4Q8NGN3 311 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 OR10G9Q8NGN4 311 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 OR10G7Q8NGN6 311 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 LYPD6BQ8NI32 183 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 FAM213BQ8TBF2 198 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 MYOZ3Q8TDC0 251 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 WIPF2Q8TF74 440 aaPredicted RBP5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 MBD3L1Q8WWY6 194 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF414Q96IQ9 312 aa5.6□□□□□ -1.51
HMBOX1-214ENST00000560357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 WI2-2373I1.2A0A1W2PRP0 233 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 NUPL2O15504 423 aaKnown RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TGOLN2O43493 480 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 OR2C1O95371 312 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TOMM40O96008 361 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TRBV12-3P01733 135 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 IGHV3-11P01762 117 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 H2AFB1P0C5Y9 115 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 PLP1P60201 277 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 SRSF2Q01130 221 aaKnown RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TCTEX1D4Q5JR98 221 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 FAM122CQ6P4D5 195 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 SPSB3Q6PJ21 355 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 PATE2Q6UY27 113 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 ZNF600Q6ZNG1 722 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 SSX7Q7RTT5 188 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 OR4X2Q8NGF9 303 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 OR51G1Q8NGK1 321 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 Q8WTZ3 238 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TMEM37Q8WXS4 190 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 RAB24Q969Q5 203 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 RCC1LQ96I51 464 aaKnown RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 C19orf24Q9BVV8 132 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 ACTR3CQ9C0K3 210 aaPredicted RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 SEPSECSQ9HD40 501 aaKnown RBP5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 DNAJC4Q9NNZ3 241 aa5.59□□□□□ -1.51
HMBOX1-214ENST00000560357 TRAV1-1A0A0B4J248 108 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 CTXND1A0A1B0GTU2 59 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 A0A1W2PPV4 95 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 ANKRD34BA5PLL1 514 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 PPP5D1E7EU14 171 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 COX7A2P2O60397 106 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 HYPMO75409 117 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 SCGB2A1O75556 95 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 EIF3GO75821 320 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 OR5G3P0C626 314 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 ORM2P19652 201 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 ARL3P36405 182 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 CDC34P49427 236 aaPredicted RBP5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 RHOBP62745 196 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 FAM78BQ5VT40 261 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 SPATA31B1PQ5VZV4 182 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 LCN15Q6UWW0 184 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 OR1L4Q8NGR5 311 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 OR1B1Q8NGR6 318 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 OR4F5Q8NH21 305 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 GATAD1Q8WUU5 269 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 SFT2D1Q8WV19 159 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 UBE2E2Q96LR5 201 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 HRH4Q9H3N8 390 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 SLC25A22Q9H936 323 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 GNB4Q9HAV0 340 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 MED9Q9NWA0 146 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 MRPL27Q9P0M9 148 aaKnown RBP5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 DOK5Q9P104 306 aa5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 PEF1Q9UBV8 284 aaKnown RBP5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 PUS1Q9Y606 427 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMBOX1-214ENST00000560357 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 IGHV3-35A0A0C4DH35 117 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 CLPSL1A2RUU4 121 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 TEX46H3BTG2 121 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 BMPR1BO00238 502 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 HMGB3O15347 200 aaKnown RBP5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 HBE1P02100 147 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 IL4P05112 153 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 STAG3L2P0CL84 134 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 STAG3L3P0CL85 134 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 CDX1P47902 265 aaPredicted RBP5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 PROK1P58294 105 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 LYZP61626 148 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 CCL20P78556 96 aa5.57□□□□□ -1.52
HMBOX1-214ENST00000560357 RELQ04864 619 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms