RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ELLP55199 621 aaPredicted RBP5.01□□□□□ -1.61
SPG11-221ENST00000560299 RHOBP62745 196 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 CFHR3Q02985 330 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 RELQ04864 619 aaPredicted RBP5.01□□□□□ -1.61
SPG11-221ENST00000560299 NDUFA5Q16718 116 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 TMEM95Q3KNT9 176 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 KRTAP24-1Q3LI83 254 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 FAM74A1Q5RGS3 127 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 ZNF329Q86UD4 541 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 KLHDC1Q8N7A1 406 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 STPG3Q8N7X2 389 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 OR51G1Q8NGK1 321 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 OR10G4Q8NGN3 311 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 OR10G9Q8NGN4 311 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 OR10G7Q8NGN6 311 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 ZNF502Q8TBZ5 544 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 GATAD1Q8WUU5 269 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 DNAJC4Q9NNZ3 241 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 SERTAD4Q9NUC0 356 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 SLC45A2Q9UMX9 530 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 IGKV1OR2-108A0A075B7D4 117 aa5□□□□□ -1.61
SPG11-221ENST00000560299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5□□□□□ -1.61
SPG11-221ENST00000560299 MFSD2BA6NFX1 497 aa5□□□□□ -1.61
SPG11-221ENST00000560299 NUDT19A8MXV4 375 aa5□□□□□ -1.61
SPG11-221ENST00000560299 BMPR1BO00238 502 aa5□□□□□ -1.61
SPG11-221ENST00000560299 COX7A2P2O60397 106 aa5□□□□□ -1.61
SPG11-221ENST00000560299 HYPMO75409 117 aa5□□□□□ -1.61
SPG11-221ENST00000560299 TOMM40O96008 361 aa5□□□□□ -1.61
SPG11-221ENST00000560299 H2AFB1P0C5Y9 115 aa5□□□□□ -1.61
SPG11-221ENST00000560299 LINC00869P0C866 280 aa5□□□□□ -1.61
SPG11-221ENST00000560299 IGLC1P0CG04 106 aa5□□□□□ -1.61
SPG11-221ENST00000560299 TAS2R45P59539 299 aa5□□□□□ -1.61
SPG11-221ENST00000560299 TIGITQ495A1 244 aa5□□□□□ -1.61
SPG11-221ENST00000560299 CLLU1Q5K131 121 aa5□□□□□ -1.61
SPG11-221ENST00000560299 MIC13Q5XKP0 118 aa5□□□□□ -1.61
SPG11-221ENST00000560299 CLEC19AQ6UXS0 136 aa5□□□□□ -1.61
SPG11-221ENST00000560299 ZNF600Q6ZNG1 722 aa5□□□□□ -1.61
SPG11-221ENST00000560299 RNF152Q8N8N0 203 aa5□□□□□ -1.61
SPG11-221ENST00000560299 OR5AU1Q8NGC0 362 aa5□□□□□ -1.61
SPG11-221ENST00000560299 FAM213BQ8TBF2 198 aa5□□□□□ -1.61
SPG11-221ENST00000560299 WFDC12Q8WWY7 111 aa5□□□□□ -1.61
SPG11-221ENST00000560299 UBE2E2Q96LR5 201 aa5□□□□□ -1.61
SPG11-221ENST00000560299 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
SPG11-221ENST00000560299 GNB4Q9HAV0 340 aa5□□□□□ -1.61
SPG11-221ENST00000560299 RPRMQ9NS64 109 aa5□□□□□ -1.61
SPG11-221ENST00000560299 MRPL36Q9P0J6 103 aaKnown RBP5□□□□□ -1.61
SPG11-221ENST00000560299 S4R3C0 116 aa5□□□□□ -1.61
SPG11-221ENST00000560299 IGKV1D-37A0A075B6S9 117 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 CTXND1A0A1B0GTU2 59 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 CLPSL1A2RUU4 121 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 TGOLN2O43493 480 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 YIF1AO95070 293 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 IGKV1-17P01599 117 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 IGHV3-23P01764 117 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 CTSGP08311 255 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 OR5G3P0C626 314 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 PSG1P11464 419 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 ORM2P19652 201 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 GPR183P32249 361 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 ARL3P36405 182 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 CDX1P47902 265 aaPredicted RBP4.99□□□□□ -1.61
SPG11-221ENST00000560299 CDC34P49427 236 aaPredicted RBP4.99□□□□□ -1.61
SPG11-221ENST00000560299 PLP1P60201 277 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 LYZP61626 148 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 ZNF90Q03938 601 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 FAM106AQ4KMX7 169 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 FAM78BQ5VT40 261 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 C10orf113Q5VZT2 155 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 ZNF343Q6P1L6 599 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 ZNF491Q8N8L2 437 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 OR1B1Q8NGR6 318 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 LINC01006Q8NI28 216 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 SFT2D1Q8WV19 159 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 NARS2Q96I59 477 aaKnown RBP4.99□□□□□ -1.61
SPG11-221ENST00000560299 MRPL32Q9BYC8 188 aaKnown RBP4.99□□□□□ -1.61
SPG11-221ENST00000560299 KLK15Q9H2R5 256 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 PEF1Q9UBV8 284 aaKnown RBP4.99□□□□□ -1.61
SPG11-221ENST00000560299 HIGD1AQ9Y241 93 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 RNF114Q9Y508 228 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 MGAM2Q2M2H8 2515 aa4.99□□□□□ -1.61
SPG11-221ENST00000560299 PKD1L1Q8TDX9 2849 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 TRAV1-1A0A0B4J248 108 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 ANKRD34BA5PLL1 514 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 SEC14L6B5MCN3 397 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 NDUFA4O00483 81 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 GGCTO75223 188 aaKnown RBP4.98□□□□□ -1.61
SPG11-221ENST00000560299 OR2C1O95371 312 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 CXorf1O96002 111 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 IGHV3-11P01762 117 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 IL4P05112 153 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 RPLP1P05386 114 aaKnown RBP4.98□□□□□ -1.61
SPG11-221ENST00000560299 NMBP08949 121 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 LGALS1P09382 135 aaKnown RBP4.98□□□□□ -1.61
SPG11-221ENST00000560299 ZP3P21754 424 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 GATA2P23769 480 aaPredicted RBP4.98□□□□□ -1.61
SPG11-221ENST00000560299 PPT1P50897 306 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 DEFA5Q01523 94 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 RPEL1Q2QD12 228 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 KHDC3LQ587J8 217 aa4.98□□□□□ -1.61
SPG11-221ENST00000560299 C4orf48Q5BLP8 95 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms