RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RAB11AP62491 216 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 HBG1P69891 147 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 HBG2P69892 147 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 RPP30P78346 268 aaKnown RBP4.01□□□□□ -1.77
SPG11-220ENST00000559933 SLC35B1P78383 322 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 ATP5G2Q06055 141 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 ZNF345Q14585 488 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 C21orf62-AS1Q17RA5 79 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 VWC2Q2TAL6 325 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 NSUN5P1Q3KNT7 163 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 AWAT1Q58HT5 328 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 GCSAMLQ5JQS6 135 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 MIC13Q5XKP0 118 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 TEX38Q6PEX7 206 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 BTNL8Q6UX41 500 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 HSD17B13Q7Z5P4 300 aaPredicted RBP4.01□□□□□ -1.77
SPG11-220ENST00000559933 ZNF491Q8N8L2 437 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 NECAP1Q8NC96 275 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 KLHL30-AS1Q8NEE0 82 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 OR4X2Q8NGF9 303 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 OR4F5Q8NH21 305 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 SPATA3Q8NHX4 192 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 MYOZ3Q8TDC0 251 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 EEF1AKMT3Q96AZ1 226 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 SLC35E1Q96K37 410 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 ARPC5LQ9BPX5 153 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 C19orf24Q9BVV8 132 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 GGTLC1Q9BX51 225 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 ZNF471Q9BX82 626 aaPredicted RBP4.01□□□□□ -1.77
SPG11-220ENST00000559933 UQCC1Q9NVA1 299 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 C21orf62Q9NYP8 219 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 DOK5Q9P104 306 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
SPG11-220ENST00000559933 IGHV3-49A0A0A0MS15 119 aa4□□□□□ -1.77
SPG11-220ENST00000559933 RPS10-NUDT3A0A1W2PQS6 291 aa4□□□□□ -1.77
SPG11-220ENST00000559933 TCRBV4S1A1TA0A5B7 111 aa4□□□□□ -1.77
SPG11-220ENST00000559933 FAM223BA6NKX1 122 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ZFP92A6NM28 416 aa4□□□□□ -1.77
SPG11-220ENST00000559933 H3BUA1 57 aa4□□□□□ -1.77
SPG11-220ENST00000559933 AGPAT2O15120 278 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ZNF207O43670 478 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 GNG7O60262 68 aa4□□□□□ -1.77
SPG11-220ENST00000559933 CLN5O75503 358 aa4□□□□□ -1.77
SPG11-220ENST00000559933 OR2C1O95371 312 aa4□□□□□ -1.77
SPG11-220ENST00000559933 CLEC3BP05452 202 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ELANEP08246 267 aa4□□□□□ -1.77
SPG11-220ENST00000559933 LGALS1P09382 135 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 HIST1H1BP16401 226 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 ATP6V0CP27449 155 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ARL3P36405 182 aa4□□□□□ -1.77
SPG11-220ENST00000559933 RAB2AP61019 212 aa4□□□□□ -1.77
SPG11-220ENST00000559933 RPL15P61313 204 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 IFITM2Q01629 132 aa4□□□□□ -1.77
SPG11-220ENST00000559933 KLK9Q2XQG4 91 aa4□□□□□ -1.77
SPG11-220ENST00000559933 SPATA31B1PQ5VZV4 182 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ALKAL2Q6UX46 152 aa4□□□□□ -1.77
SPG11-220ENST00000559933 UNQ9165/PRO28630Q6UXU0 137 aa4□□□□□ -1.77
SPG11-220ENST00000559933 SSX7Q7RTT5 188 aa4□□□□□ -1.77
SPG11-220ENST00000559933 FAM223AQ8IWN6 122 aa4□□□□□ -1.77
SPG11-220ENST00000559933 BPIFCQ8NFQ6 507 aa4□□□□□ -1.77
SPG11-220ENST00000559933 OR4X1Q8NH49 305 aa4□□□□□ -1.77
SPG11-220ENST00000559933 TMED6Q8WW62 240 aa4□□□□□ -1.77
SPG11-220ENST00000559933 RAX2Q96IS3 184 aa4□□□□□ -1.77
SPG11-220ENST00000559933 TMEM68Q96MH6 324 aa4□□□□□ -1.77
SPG11-220ENST00000559933 NPCDR1Q9BY65 106 aa4□□□□□ -1.77
SPG11-220ENST00000559933 WDR61Q9GZS3 305 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 SLC25A32Q9H2D1 315 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ZMAT4Q9H898 229 aa4□□□□□ -1.77
SPG11-220ENST00000559933 CACFD1Q9UGQ2 172 aa4□□□□□ -1.77
SPG11-220ENST00000559933 ZNF580Q9UK33 172 aa4□□□□□ -1.77
SPG11-220ENST00000559933 KLK9Q9UKQ9 250 aa4□□□□□ -1.77
SPG11-220ENST00000559933 LSM4Q9Y4Z0 139 aaKnown RBP4□□□□□ -1.77
SPG11-220ENST00000559933 IGHV3OR16-13A0A075B7E8 117 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 IGHV3-74A0A0B4J1X5 117 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 IGHV3-66A0A0C4DH42 116 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 A0A0D9SG52 128 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 A0A1B0GV50 99 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 TMEM89A2RUT3 159 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 TEX46H3BTG2 121 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 I3L521 148 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 CORTO00230 105 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 HMGB3O15347 200 aaKnown RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 TGOLN2O43493 480 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 YIF1AO95070 293 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 IFNA5P01569 189 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 CTSGP08311 255 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 SNRPCP09234 159 aaKnown RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 LINC00869P0C866 280 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 PRB4P10163 310 aaPredicted RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 GYPEP15421 78 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 GPX4P36969 197 aaPredicted RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 CAMLGP49069 296 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 FHITP49789 147 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 MFAP4P55083 255 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 LYZP61626 148 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 USF2Q15853 346 aaPredicted RBP3.99□□□□□ -1.77
SPG11-220ENST00000559933 FFAR4Q5NUL3 377 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 MORN5Q5VZ52 161 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 LEMD1Q68G75 181 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms