RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 PRRT1Q99946 306 aa13.5□□□□□ -0.25
CDC42BPB-206ENST00000559790 SLIRPQ9GZT3 109 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-206ENST00000559790 NRN1Q9NPD7 142 aa13.5□□□□□ -0.25
CDC42BPB-206ENST00000559790 TBC1D24Q9ULP9 559 aa13.5□□□□□ -0.25
CDC42BPB-206ENST00000559790 IGHV4-4A0A075B6R2 117 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 SOCS3O14543 225 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 IL18Q14116 193 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 C12orf74Q32Q52 190 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 SIGLEC15Q6ZMC9 328 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF767PQ75MW2 155 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 OR51G1Q8NGK1 321 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 WDR12Q9GZL7 423 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 RBKSQ9H477 322 aa13.49□□□□□ -0.25
CDC42BPB-206ENST00000559790 PKD1P98161 4303 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 DYNC1H1Q14204 4646 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 A0A0B4J2A0 478 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 AMBPP02760 352 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 HLA-DRB4P13762 266 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 TRIM63Q969Q1 353 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 DIRAS2Q96HU8 199 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 NARS2Q96I59 477 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 SHPKQ9UHJ6 478 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 HLA-DRB4X5D2U9 266 aa13.48□□□□□ -0.25
CDC42BPB-206ENST00000559790 IGKV1OR2-108A0A075B7D4 117 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 TRAV10A0A0B4J240 114 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF705FA8MVS1 300 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 PITX3O75364 302 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 SCGB2A1O75556 95 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF705DP0CH99 300 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF705BP0CI00 300 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 RD3LP0DJH9 198 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF90Q03938 601 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 DTD1Q8TEA8 209 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 RNF125Q96EQ8 232 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 XCL2Q9UBD3 114 aa13.47□□□□□ -0.25
CDC42BPB-206ENST00000559790 GAMTQ14353 236 aa13.46□□□□□ -0.25
CDC42BPB-206ENST00000559790 SMCO1Q147U7 214 aa13.46□□□□□ -0.25
CDC42BPB-206ENST00000559790 ZNF709Q8N972 641 aa13.46□□□□□ -0.25
CDC42BPB-206ENST00000559790 PRSS46E5RG02 174 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 EIF2B2P49770 351 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 CCR6P51684 374 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 KLF9Q13886 244 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 ETFRF1Q6IPR1 90 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 LGI3Q8N145 548 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 RNF126Q9BV68 326 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 MUC4Q99102 2169 aa13.45□□□□□ -0.26
CDC42BPB-206ENST00000559790 A0A1B0GVY2 172 aa13.44□□□□□ -0.26
CDC42BPB-206ENST00000559790 IFNA10P01566 189 aa13.44□□□□□ -0.26
CDC42BPB-206ENST00000559790 TNFSF8P32971 234 aa13.44□□□□□ -0.26
CDC42BPB-206ENST00000559790 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
CDC42BPB-206ENST00000559790 U3KQ87 197 aa13.44□□□□□ -0.26
CDC42BPB-206ENST00000559790 H3BMQ9 156 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 AKR1C4P17516 323 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 TMBIM6P55061 237 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 OR8G2PQ6IF36 304 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 BCL7BQ9BQE9 202 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 RABL2AQ9UBK7 228 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 RABL2BQ9UNT1 228 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 DNAH11Q96DT5 4516 aa13.43□□□□□ -0.26
CDC42BPB-206ENST00000559790 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 ZNF79Q15937 498 aa13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 NEU1Q99519 415 aa13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 SCP2D1Q9UJQ7 156 aa13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 V9GYH0 126 aa13.42□□□□□ -0.26
CDC42BPB-206ENST00000559790 DEFB131BA0A096LNP1 70 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 A8MTW9 85 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 FXYD7P58549 80 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 NOXA1Q86UR1 476 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 THAP8Q8NA92 274 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 C20orf173Q96LM9 149 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 CLUHP3Q96NS8 147 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 PBDC1Q9BVG4 233 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 MCUBQ9NWR8 336 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 RSL24D1Q9UHA3 163 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 KCNIP3Q9Y2W7 256 aa13.41□□□□□ -0.26
CDC42BPB-206ENST00000559790 F6UB75 175 aa13.4□□□□□ -0.26
CDC42BPB-206ENST00000559790 GPX4P36969 197 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPB-206ENST00000559790 LRTM2Q8N967 370 aa13.4□□□□□ -0.26
CDC42BPB-206ENST00000559790 C1QTNF4Q9BXJ3 329 aa13.4□□□□□ -0.26
CDC42BPB-206ENST00000559790 SLC35B3Q9H1N7 401 aa13.4□□□□□ -0.26
CDC42BPB-206ENST00000559790 ZFP92A6NM28 416 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 IAPPP10997 89 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 PSMB3P49720 205 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 PAX9P55771 341 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 LYZP61626 148 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 OR2F1Q13607 317 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 FOXI2Q6ZQN5 318 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 C1orf158Q8N1D5 194 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 TRGV9Q99603 122 aa13.39□□□□□ -0.27
CDC42BPB-206ENST00000559790 RTL8CO15255 209 aa13.38□□□□□ -0.27
CDC42BPB-206ENST00000559790 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms