RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 IGF1P05019 195 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 ATP5G3P48201 142 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 YPEL3P61236 119 aaPredicted RBP9.93□□□□□ -0.82
USP3-213ENST00000559711 RHEBQ15382 184 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 CST9LP1Q5W188 147 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 LINC00305Q7Z4B0 112 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
USP3-213ENST00000559711 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 TVP23CQ96ET8 276 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 FBXL7Q9UJT9 491 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 YTHDF2Q9Y5A9 579 aaKnown RBP9.93□□□□□ -0.82
USP3-213ENST00000559711 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 NBPF19A0A087WUL8 3843 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 F6UZH7 168 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 NPPCP23582 126 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 WFDC11Q8NEX6 87 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 OR5AU1Q8NGC0 362 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 UHRF2Q96PU4 802 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 MRPL27Q9P0M9 148 aaKnown RBP9.93□□□□□ -0.82
USP3-213ENST00000559711 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 MDFIC2A0A1B0GVS7 189 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 GNG7O60262 68 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 PNRC1Q12796 327 aaPredicted RBP9.92□□□□□ -0.82
USP3-213ENST00000559711 TMEM88Q6PEY1 159 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 RPS10P5Q9NQ39 176 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 S4R3C0 116 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
USP3-213ENST00000559711 GCN1Q92616 2671 aaKnown RBP9.92□□□□□ -0.82
USP3-213ENST00000559711 PDZD2O15018 2839 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
USP3-213ENST00000559711 BRI3O95415 125 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 IER3P46695 156 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 RHOGP84095 191 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 Q56UQ5 140 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 ZNF491Q8N8L2 437 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 ZNF502Q8TBZ5 544 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 RPUSD4Q96CM3 377 aaKnown RBP9.91□□□□□ -0.82
USP3-213ENST00000559711 FOXC2Q99958 501 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 SMIM7Q9BQ49 75 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 PAXXQ9BUH6 204 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 PARLQ9H300 379 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 OR51M1Q9H341 326 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 HIGD1AQ9Y241 93 aa9.91□□□□□ -0.82
USP3-213ENST00000559711 PRRC2AP48634 2157 aaKnown RBP9.91□□□□□ -0.82
USP3-213ENST00000559711 WI2-2373I1.2A0A1W2PRP0 233 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 OR2C1O95371 312 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 IGHV4-59P01825 116 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 CTSGP08311 255 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 OR10J4P0C629 311 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 LYZP61626 148 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 BLCAPP62952 87 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 KIAA0141Q14154 515 aaPredicted RBP9.9□□□□□ -0.82
USP3-213ENST00000559711 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 C15orf32Q32M92 178 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.9□□□□□ -0.82
USP3-213ENST00000559711 OR5R1Q8NH85 324 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 FXYD5Q96DB9 178 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 PRDM13Q9H4Q3 707 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
USP3-213ENST00000559711 A0A087WWC5 75 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 B4DEV8 164 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 SCGB2A1O75556 95 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 UBE2L3P68036 154 aaKnown RBP9.9□□□□□ -0.83
USP3-213ENST00000559711 C9orf152Q5JTZ5 239 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 CIARTQ8N365 385 aaPredicted RBP9.9□□□□□ -0.83
USP3-213ENST00000559711 Q8WTZ3 238 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 C11orf52Q96A22 123 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 SLC25A39Q9BZJ4 359 aaPredicted RBP9.9□□□□□ -0.83
USP3-213ENST00000559711 TUBA4BQ9H853 241 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 ZNF580Q9UK33 172 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 CSMD1Q96PZ7 3565 aa9.9□□□□□ -0.83
USP3-213ENST00000559711 CR1P17927 2039 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 NDUFB4O95168 129 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 PYYP10082 97 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
USP3-213ENST00000559711 AKR1C3P42330 323 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 ZNF343Q6P1L6 599 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 Q6YL49 198 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 RNF125Q96EQ8 232 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 ATP6V0BQ99437 205 aa9.89□□□□□ -0.83
USP3-213ENST00000559711 GAR1Q9NY12 217 aaKnown RBP9.89□□□□□ -0.83
USP3-213ENST00000559711 ITPR2Q14571 2701 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 ITPR3Q14573 2671 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 CCDC168Q8NDH2 2452 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 SCO2A0A1W2PP80 73 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 H3BUA1 57 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 AP4M1O00189 453 aa9.88□□□□□ -0.83
USP3-213ENST00000559711 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms