RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.01
CARMIL3-202ENST00000559694 A0A1W2PRX2 142 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 NUDT3O95989 172 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 PF4P02776 101 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 GCHFRP30047 84 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 SAA4P35542 130 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 PRDM13Q9H4Q3 707 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 HIGD1AQ9Y241 93 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 WNT2P09544 360 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 FCGR2BP31994 310 aaPredicted RBP8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 ERVK11-1P61568 191 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 SAPCD1Q5SSQ6 148 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 ZNF430Q9H8G1 570 aaPredicted RBP8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV1-3A0A0C4DH29 117 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 UPK2O00526 184 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 LINC00614P0C842 121 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 LMO1P25800 156 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 MAS1LP35410 378 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 TPTE2P1Q5T6R2 138 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV3OR16-8A0A075B7F1 116 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 J3KRW8 73 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 IGLV3-1P01715 115 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 PRSS1P07477 247 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 BTF3P20290 206 aaKnown RBP8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 PLP1P60201 277 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 RBPMS2Q6ZRY4 209 aaKnown RBP8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 METTL26Q96S19 204 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 A8MWL6 223 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 LOXP28300 417 aaPredicted RBP8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 RELBQ01201 579 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 CR1LQ2VPA4 569 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 EEF1AKMT3Q96AZ1 226 aa8.7□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV3-49A0A0A0MS15 119 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 SRD5A1P18405 259 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 TEX38Q6PEX7 206 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 NIT1Q86X76 327 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 RRHO14718 337 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 HTN1P15515 57 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 ANOS1P23352 680 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 SRSF7Q16629 238 aaKnown RBP eCLIP8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 STXBP6Q8NFX7 210 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 NMUP48645 174 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 DAZAP2Q15038 168 aaPredicted RBP8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 RUSC1-AS1Q66K80 236 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 SLC25A48Q6ZT89 311 aaKnown RBP8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 TRANK1O15050 2925 aa8.69□□□□□ -1.02
CARMIL3-202ENST00000559694 TRBV6-6A0A0A6YYG2 114 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 RNF166Q96A37 237 aaPredicted RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 TMEM70Q9BUB7 260 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 ZFP30Q9Y2G7 519 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 TRAV30A0A087WSZ9 112 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 A0A1W2PS18 150 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 GPR183P32249 361 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 MBNL3Q9NUK0 354 aaKnown RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 OOSP1A8MZH6 123 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 RIGQ13278 110 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 DEFB113Q30KQ7 82 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 TEX36Q5VZQ5 186 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 LHFPL4Q7Z7J7 247 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 OCC1Q8TAD7 63 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 KCNS1Q96KK3 526 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 SPOCK3Q9BQ16 436 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 FLNBO75369 2602 aaKnown RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 CIDEAO60543 219 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 IL4P05112 153 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 FBLN7Q53RD9 439 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 NMSQ5H8A3 153 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 FAM53AQ6NSI3 398 aaPredicted RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 TEX45Q8NA69 505 aa8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 FOXA2Q9Y261 457 aaPredicted RBP8.68□□□□□ -1.02
CARMIL3-202ENST00000559694 EML5Q05BV3 1969 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 HLA-DRB1P01911 266 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 NPPCP23582 126 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 VDAC2P45880 294 aaPredicted RBP8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 LDLRAD2Q5SZI1 272 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 IGHV4-39P01824 125 aa8.67□□□□□ -1.02
CARMIL3-202ENST00000559694 GATA3P23771 443 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms