RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TSC22D2O75157 780 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 SCGB2A1O75556 95 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 DFFBO76075 338 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 RD3LP0DJH9 198 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 NPPCP23582 126 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 TFPI2P48307 235 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 GBGT1Q8N5D6 347 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 CITED4Q96RK1 184 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 METTL26Q96S19 204 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 SPAG8Q99932 426 aaPredicted RBP13.96□□□□□ -0.17
CASC4-209ENST00000559222 U3KQE9 123 aa13.96□□□□□ -0.17
CASC4-209ENST00000559222 FAM24AA6NFZ4 105 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 OR11H12B2RN74 326 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 GATA2P23769 480 aaPredicted RBP13.95□□□□□ -0.18
CASC4-209ENST00000559222 TAS2R30P59541 319 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 ODF3L2Q3SX64 289 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 STPG3Q8N7X2 389 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 TRGV9Q99603 122 aa13.95□□□□□ -0.18
CASC4-209ENST00000559222 SMCO3A2RU48 225 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 RBMY1BA6NDE4 496 aaKnown RBP13.94□□□□□ -0.18
CASC4-209ENST00000559222 RBMY1EA6NEQ0 496 aaKnown RBP13.94□□□□□ -0.18
CASC4-209ENST00000559222 A8MZ25 164 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 PTTG1O95997 202 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 HNRNPCP07910 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
CASC4-209ENST00000559222 RBMY1DP0C7P1 496 aaKnown RBP13.94□□□□□ -0.18
CASC4-209ENST00000559222 P2RY1P47900 373 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 H2BFSP57053 126 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 LAMTOR1Q6IAA8 161 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 FAM24BQ8N5W8 94 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 RNF125Q96EQ8 232 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 SRD5A3Q9H8P0 318 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 ALG5Q9Y673 324 aa13.94□□□□□ -0.18
CASC4-209ENST00000559222 IGSF23A1L1A6 192 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 L7N2F9 121 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 LYZP61626 148 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 VAMP2P63027 116 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 ZNF124Q15973 351 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 WFDC3Q8IUB2 231 aa13.93□□□□□ -0.18
CASC4-209ENST00000559222 H0YIZ8 118 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 BCAP31P51572 246 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 DLK1P80370 383 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 LINC00322Q6ZN03 302 aaPredicted RBP13.92□□□□□ -0.18
CASC4-209ENST00000559222 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
CASC4-209ENST00000559222 SSNA1O43805 119 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 CST7O76096 145 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 CAV2P51636 162 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 LRRC37A5PQ49AS3 106 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 C16orf54Q6UWD8 224 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 OR10P1Q8NGE3 313 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 MS4A6AQ9H2W1 248 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 MGAT4CQ9UBM8 478 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 RABAC1Q9UI14 185 aa13.91□□□□□ -0.18
CASC4-209ENST00000559222 OR4C46A6NHA9 309 aa13.9□□□□□ -0.18
CASC4-209ENST00000559222 HAGHQ16775 308 aa13.9□□□□□ -0.18
CASC4-209ENST00000559222 APRG1Q8IVJ8 170 aa13.9□□□□□ -0.18
CASC4-209ENST00000559222 RETNQ9HD89 108 aa13.9□□□□□ -0.18
CASC4-209ENST00000559222 DEDDO75618 318 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 EIF2B2P49770 351 aaKnown RBP13.89□□□□□ -0.19
CASC4-209ENST00000559222 RPL11P62913 178 aaKnown RBP13.89□□□□□ -0.19
CASC4-209ENST00000559222 SLC38A11Q08AI6 406 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 CYP2G1PQ6ZSU1 146 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 TMEM217Q8N7C4 229 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 NMES1Q9C002 83 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 TMEM231Q9H6L2 316 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 MAP6D1Q9H9H5 199 aa13.89□□□□□ -0.19
CASC4-209ENST00000559222 LYRM2Q9NU23 88 aaPredicted RBP13.89□□□□□ -0.19
CASC4-209ENST00000559222 TENM3Q9P273 2699 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 A0A1W2PS18 150 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 BUB3O43684 328 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 CXCL3P19876 107 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 BMI1P35226 326 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 TMEM252Q8N6L7 170 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 NBEAL2Q6ZNJ1 2754 aa13.88□□□□□ -0.19
CASC4-209ENST00000559222 PVALBP20472 110 aaPredicted RBP13.87□□□□□ -0.19
CASC4-209ENST00000559222 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
CASC4-209ENST00000559222 TM2D3Q9BRN9 247 aa13.87□□□□□ -0.19
CASC4-209ENST00000559222 DOK5Q9P104 306 aa13.87□□□□□ -0.19
CASC4-209ENST00000559222 FNDC10F2Z333 226 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 K7EQG2 157 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 FABP1P07148 127 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 NHLRC4P0CG21 123 aaPredicted RBP13.86□□□□□ -0.19
CASC4-209ENST00000559222 DCANP1Q8TF63 244 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 GRAMD2BQ96HH9 432 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 MGST2Q99735 147 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 RNF126Q9BV68 326 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 NPVFQ9HCQ7 196 aa13.86□□□□□ -0.19
CASC4-209ENST00000559222 DNASE2O00115 360 aaPredicted RBP13.85□□□□□ -0.19
CASC4-209ENST00000559222 ORM2P19652 201 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 SULT1A1P50225 295 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 FCN2Q15485 313 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 BPIFCQ8NFQ6 507 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 OR11H7Q8NGC8 314 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 OR1B1Q8NGR6 318 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms