RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 SELENOTP62341 195 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 CX3CL1P78423 397 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 Q6ZVH6 145 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 OR4A5Q8NH83 315 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 VKORC1Q9BQB6 163 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 C20orf144Q9BQM9 153 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 IGKV3D-15A0A087WSY6 115 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 C9JCJ5 164 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 IGKV3-15P01624 115 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 CD24P25063 80 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 TDRG1Q3Y452 100 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 Q6ZT83 130 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 CD177Q8N6Q3 437 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 COQ2Q96H96 371 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 PROK2Q9HC23 129 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 ABCA7Q8IZY2 2146 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 NKX2-8O15522 239 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 NBEAP1P0C6P0 100 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 TMEM144Q7Z5S9 345 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 OR9G4Q8NGQ1 327 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 MS4A6AQ9H2W1 248 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 RABAC1Q9UI14 185 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 A0A087X0K7 114 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 IGHV2OR16-5A0A0B4J2B6 119 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 PSG3Q16557 428 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 BCL6BQ8N143 479 aaPredicted RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 DLX4Q92988 240 aaPredicted RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 Q9H3A6 140 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 SPRR3Q9UBC9 169 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 UPK2O00526 184 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 IL18BPO95998 194 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 KIR3DL3Q8N743 410 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 DEFB124Q8NES8 71 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 NUP35Q8NFH5 326 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 RCHY1Q96PM5 261 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 CGB1A6NKQ9 187 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 TMEM238C9JI98 176 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 NPIPB11E5RHQ5 1161 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 YPEL1O60688 119 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 RPL15P61313 204 aaKnown RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 MLANAQ16655 118 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 FMC1Q96HJ9 113 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 YPEL2Q96QA6 119 aa5.86□□□□□ -1.47
USP3-210ENST00000559192 MRPS18CQ9Y3D5 142 aaKnown RBP5.86□□□□□ -1.47
USP3-210ENST00000559192 GFRA3O60609 400 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 ZNF56Q15929 161 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 FER1L6-AS1Q8NA97 138 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 ASCL2Q99929 193 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 B5MCH6 92 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 J3QW42 95 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 K7EN84 100 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 ZNF138P52744 262 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 FXYD7P58549 80 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 ERVK11-1P61568 191 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 ERG28Q9UKR5 140 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 PSMB11A5LHX3 300 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 RBMY1BA6NDE4 496 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 RBMY1EA6NEQ0 496 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 PRR33A8MZF0 331 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 CD5LO43866 347 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 DPM2O94777 84 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 RBMY1DP0C7P1 496 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 RBMY1A1P0DJD3 496 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 RBMY1CP0DJD4 496 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 TDGF1P13385 188 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 WDR86Q86TI4 376 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 FGF23Q9GZV9 251 aaPredicted RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 IGKV3OR2-268A0A0C4DH90 116 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 MLNRO43193 412 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 GFRALQ6UXV0 394 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 SRSF8Q9BRL6 282 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 SCRT1Q9BWW7 348 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 SLC25A2Q9BXI2 301 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 CLEC7AQ9BXN2 247 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 A0A1W2PRE2 83 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 GGTLC3B5MD39 225 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 CDX4O14627 284 aaPredicted RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 AZU1P20160 251 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 LEPP41159 167 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 Q0VG73 95 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 TRIP6Q15654 476 aaKnown RBP5.85□□□□□ -1.47
USP3-210ENST00000559192 C2orf82Q6UX34 121 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 TMEM105Q8N8V8 129 aa5.85□□□□□ -1.47
USP3-210ENST00000559192 PRCDQ00LT1 54 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 FAM74A4Q5TZK3 123 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 GAGE2AQ6NT46 116 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 TEX43Q6ZNM6 134 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 ORMDL3Q8N138 153 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 STPG4Q8N801 248 aa5.84□□□□□ -1.47
USP3-210ENST00000559192 OR10J6PQ8NGY7 276 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms