RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 CCL7P80098 99 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 CACNA1BQ00975 2339 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 BRMS1LQ5PSV4 323 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 TRABDQ9H4I3 376 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 VPS29Q9UBQ0 182 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 UBR2Q8IWV8 1755 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 MRC1P22897 1456 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 KMT2BQ9UMN6 2715 aaPredicted RBP4.42□□□□□ -1.7
CASC4-208ENST00000559151 ZNF609O15014 1411 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 BDP1A6H8Y1 2624 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 PSMB8P28062 276 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 ERMAPQ96PL5 475 aaPredicted RBP4.41□□□□□ -1.7
CASC4-208ENST00000559151 KLF6Q99612 283 aaPredicted RBP4.41□□□□□ -1.7
CASC4-208ENST00000559151 CISHQ9NSE2 258 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 RSL24D1Q9UHA3 163 aaKnown RBP4.41□□□□□ -1.7
CASC4-208ENST00000559151 PKIGQ9Y2B9 76 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 NCOR1O75376 2440 aa4.41□□□□□ -1.7
CASC4-208ENST00000559151 NOS1APO75052 506 aaPredicted RBP4.4□□□□□ -1.71
CASC4-208ENST00000559151 SERPINA1P01009 418 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 IDH3GP51553 393 aaPredicted RBP4.4□□□□□ -1.71
CASC4-208ENST00000559151 TMEM258P61165 79 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 LSM6P62312 80 aaKnown RBP4.4□□□□□ -1.71
CASC4-208ENST00000559151 HACD4Q5VWC8 232 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 S100A7AQ86SG5 101 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 ACOT12Q8WYK0 555 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 PPP1R2P1Q96PQ5 205 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 FUT9Q9Y231 359 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 LAMB2P55268 1798 aa4.4□□□□□ -1.71
CASC4-208ENST00000559151 CFAP54Q96N23 3096 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 TRAV38-1A0A0B4J264 116 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 A0A0J9YY10 115 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 A0A1B0GX78 115 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 CHP2O43745 196 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 TCRBP04435 133 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 CD79AP11912 226 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 HLA-DMBP28068 263 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 AESQ08117 197 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 GRK1Q15835 563 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 PRAP1Q96NZ9 151 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 OR8D2Q9GZM6 311 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 ARMC1Q9NVT9 282 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
CASC4-208ENST00000559151 USP34Q70CQ2 3546 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 WDFY4Q6ZS81 3184 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 TRBV20OR9-2A0A075B6H5 130 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 CLDN24A6NM45 220 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
CASC4-208ENST00000559151 MIF4GDA9UHW6 222 aaKnown RBP4.38□□□□□ -1.71
CASC4-208ENST00000559151 CRYZL1O95825 349 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 SLC38A11Q08AI6 406 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 TAF1AQ15573 450 aaPredicted RBP4.38□□□□□ -1.71
CASC4-208ENST00000559151 CLDN22Q8N7P3 220 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 BORCS5Q969J3 196 aa4.38□□□□□ -1.71
CASC4-208ENST00000559151 H7C2G1 150 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 MAGEA12P43365 314 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 C12orf29Q8N999 325 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 TMEM35BQ8NCS4 154 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 OR10J5Q8NHC4 309 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 MAFIPQ8WZ33 124 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 OR52E6Q96RD3 313 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 NIPSNAP1Q9BPW8 284 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 EFCAB1Q9HAE3 211 aa4.37□□□□□ -1.71
CASC4-208ENST00000559151 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
CASC4-208ENST00000559151 IGHV1-18A0A0C4DH31 117 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 A0A1B0GV72 72 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 PSMD12O00232 456 aaPredicted RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 KPNA3O00505 521 aaPredicted RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 PGLYRP1O75594 196 aaPredicted RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 SRSF6Q13247 344 aaKnown RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 ACOT6Q3I5F7 207 aaPredicted RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 PXT1Q8NFP0 134 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 RASSF5Q8WWW0 418 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 SLC7A6Q92536 515 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 HOPXQ9BPY8 73 aaPredicted RBP4.36□□□□□ -1.71
CASC4-208ENST00000559151 PCBD2Q9H0N5 130 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 ARL2BPQ9Y2Y0 163 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 UNC79Q9P2D8 2635 aa4.36□□□□□ -1.71
CASC4-208ENST00000559151 GGT3PA6NGU5 568 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 J3QKU1 62 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 PPBPP02775 128 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 EMP1P54849 157 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 TRIQKQ629K1 86 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 LYG2Q86SG7 212 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 ZNF676Q8N7Q3 588 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 IL36BQ9NZH7 164 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 ARL5AQ9Y689 179 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 RFX7Q2KHR2 1363 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 DCHS1Q96JQ0 3298 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 ZDBF2Q9HCK1 2354 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 SPTBN4Q9H254 2564 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 SSC5DA1L4H1 1573 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 LAMB1P07942 1786 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 C5orf42Q9H799 3197 aa4.35□□□□□ -1.71
CASC4-208ENST00000559151 HIST1H1TP22492 207 aaPredicted RBP4.34□□□□□ -1.71
CASC4-208ENST00000559151 RANP62826 216 aaKnown RBP4.34□□□□□ -1.71
CASC4-208ENST00000559151 SPA17Q15506 151 aa4.34□□□□□ -1.71
CASC4-208ENST00000559151 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms