RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FAM3BP58499 235 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-211ENST00000558890 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 ETFRF1Q6IPR1 90 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 MMD2Q8IY49 270 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 TEX45Q8NA69 505 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 OR1L4Q8NGR5 311 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 CFHR4Q92496 578 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 C11orf52Q96A22 123 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 JMJD8Q96S16 334 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 SSX3Q99909 188 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 PYGO2Q9BRQ0 406 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 ZNF430Q9H8G1 570 aaPredicted RBP6.11□□□□□ -1.43
LRRC28-211ENST00000558890 IGHV1-3A0A0C4DH29 117 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 A0A1W2PPQ1 181 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 M0QZK8 103 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 SLC25A17O43808 307 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 COX7A2P2O60397 106 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 OR7C2O60412 319 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BKO60814 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BJP06899 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 PFN1P07737 140 aaKnown RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 OR5G3P0C626 314 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 LINC00869P0C866 280 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 AREGP15514 252 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 SRD5A1P18405 259 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BOP23527 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BBP33778 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 CDX1P47902 265 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BDP58876 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BCP62807 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 KLRD1Q13241 179 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 GAMTQ14353 236 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 PSG5Q15238 335 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 SSX2Q16385 188 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST2H2BEQ16778 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 SPATA31B1PQ5VZV4 182 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 Q6YL49 198 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 MIR17HGQ75NE6 70 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 LINC01551Q86U37 167 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 BCL6BQ8N143 479 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 LINC00528Q8N1L1 170 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 OR5T1Q8NG75 326 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 OR2T10Q8NGZ9 312 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BHQ93079 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 ACY3Q96HD9 319 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 ZNF48Q96MX3 618 aaPredicted RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 IMMP2LQ96T52 175 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 PFDN5Q99471 154 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BNQ99877 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 HIST1H2BMQ99879 126 aa6.1□□□□□ -1.43
LRRC28-211ENST00000558890 YTHDF2Q9Y5A9 579 aaKnown RBP6.1□□□□□ -1.43
LRRC28-211ENST00000558890 C9JCJ5 164 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 CORTO00230 105 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 GGCTO75223 188 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 IGLV2-23P01705 113 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 FAM106CPP0CH98 169 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 C8orf88P0DMB2 117 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 NPPCP23582 126 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 RPL27AP46776 148 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 DLX1P56177 255 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 SELENOTP62341 195 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 UBE2L3P68036 154 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 RPL19P84098 196 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 MOB3BQ86TA1 216 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 Q8N6K4 173 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 OR51G1Q8NGK1 321 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 OR10G8Q8NGN5 311 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 MDFIQ99750 246 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 SEPSECSQ9HD40 501 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 ESM1Q9NQ30 184 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
LRRC28-211ENST00000558890 ZNF580Q9UK33 172 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 LY96Q9Y6Y9 160 aa6.09□□□□□ -1.43
LRRC28-211ENST00000558890 TRAV9-1A0A075B6T8 112 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 A0A0U1RQK1 487 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 TIMM23O14925 209 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 NDUFA3O95167 84 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 MOSP00540 346 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 TYMSP04818 313 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 IER3P46695 156 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 COMPP49747 757 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-211ENST00000558890 HILS1P60008 231 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
LRRC28-211ENST00000558890 PRB3Q04118 309 aaPredicted RBP6.08□□□□□ -1.44
LRRC28-211ENST00000558890 DIAPH2-AS1Q14236 149 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 TNXAQ16473 311 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 PRSS8Q16651 343 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 C10orf55Q5SWW7 151 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 LDLRAD2Q5SZI1 272 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 BRD3OSQ6XYD6 125 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 LHFPL4Q7Z7J7 247 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 THAP8Q8NA92 274 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 ZNF114Q8NC26 417 aa6.08□□□□□ -1.44
LRRC28-211ENST00000558890 NPBQ8NG41 125 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms