RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TMED3Q9Y3Q3 217 aa4.27□□□□□ -1.73
ZEB1-211ENST00000558440 FAT1Q14517 4588 aa4.27□□□□□ -1.73
ZEB1-211ENST00000558440 TRAV18A0A075B6X5 111 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 A0A087WYN8 130 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 TRDV1A0A1B0GX56 115 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 HELTA6NFD8 242 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 PGLYRP1O75594 196 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-211ENST00000558440 FCER2P06734 321 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 GNRHRP30968 328 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 PCP4P48539 62 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 ERVFC1-1P60608 527 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 ERHP84090 104 aaKnown RBP4.26□□□□□ -1.73
ZEB1-211ENST00000558440 OGFRL1Q5TC84 451 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-211ENST00000558440 GFI1BQ5VTD9 330 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 C22orf42Q6IC83 251 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 CMTM1Q8IZ96 169 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 OR5AP2Q8NGF4 316 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 LGALS14Q8TCE9 139 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 DCANP1Q8TF63 244 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 FCAMRQ8WWV6 532 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 TMEM230Q96A57 120 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 RAB40CQ96S21 281 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 NIPSNAP3BQ9BS92 247 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 ATG101Q9BSB4 218 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 DUSP21Q9H596 190 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 NDUFB11Q9NX14 153 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 RHBDL2Q9NX52 303 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 DAPK2Q9UIK4 370 aa4.26□□□□□ -1.73
ZEB1-211ENST00000558440 IGHV3OR16-12A0A075B7B8 117 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 A0A1B0GU03 582 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 SMIM9A6NGZ8 99 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 TNFRSF6BO95407 300 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 TMEM50AO95807 157 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 CRYBB3P26998 211 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 S100GP29377 79 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 SNCAP37840 140 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 CBX5P45973 191 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 AMTP48728 403 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 PPP5CP53041 499 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 AP2S1P53680 142 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-211ENST00000558440 SNRPD3P62318 126 aaKnown RBP4.25□□□□□ -1.73
ZEB1-211ENST00000558440 PRCDQ00LT1 54 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 FAM222AQ5U5X8 452 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 GSG1LQ6UXU4 331 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-211ENST00000558440 PRSS48Q7RTY5 328 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 H2BFWTQ7Z2G1 175 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 C6orf223Q8N319 242 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 ZNF2Q9BSG1 426 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-211ENST00000558440 IFT46Q9NQC8 304 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 EHFQ9NZC4 300 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 RFNGQ9Y644 331 aa4.25□□□□□ -1.73
ZEB1-211ENST00000558440 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
ZEB1-211ENST00000558440 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 H3BMM0 161 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 CORTO00230 105 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 GPR31O00270 319 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 CLN5O75503 358 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 SUB1P53999 127 aaKnown RBP eCLIP4.24□□□□□ -1.73
ZEB1-211ENST00000558440 HSPE1P61604 102 aaKnown RBP4.24□□□□□ -1.73
ZEB1-211ENST00000558440 OXA1LQ15070 435 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 TBCEQ15813 527 aaPredicted RBP4.24□□□□□ -1.73
ZEB1-211ENST00000558440 SPINK9Q5DT21 86 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 SFXN4Q6P4A7 337 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 SPATA12Q7Z6I5 190 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 SLC35G3Q8N808 338 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 C15orf53Q8NAA6 179 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 YTHDF1Q9BYJ9 559 aaKnown RBP4.24□□□□□ -1.73
ZEB1-211ENST00000558440 AUNIPQ9H7T9 357 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 DIABLOQ9NR28 239 aa4.24□□□□□ -1.73
ZEB1-211ENST00000558440 RRP15Q9Y3B9 282 aaKnown RBP4.24□□□□□ -1.73
ZEB1-211ENST00000558440 TRAV30A0A087WSZ9 112 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 A0A0A6YYH2 397 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 MEIS3P1A6NDR6 274 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 A6NJ64 397 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 ZNF705FA8MVS1 300 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 FAM90A26D6RGX4 464 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 PMP2P02689 132 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 ZNF705DP0CH99 300 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 ZNF705BP0CI00 300 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 HLA-DRB4P13762 266 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 OPRK1P41145 380 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 HOXA1P49639 335 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 FXYD7P58549 80 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 TAS2R46P59540 309 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 DAD1P61803 113 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 PHLDA2Q53GA4 152 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 DHRS11Q6UWP2 260 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 OR5H2Q8NGV7 314 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 TMED6Q8WW62 240 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 SEC22AQ96IW7 307 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 C7orf50Q9BRJ6 194 aaKnown RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 PDCD10Q9BUL8 212 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 FXYD6Q9H0Q3 95 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 ENY2Q9NPA8 101 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 NRN1Q9NPD7 142 aa4.23□□□□□ -1.73
ZEB1-211ENST00000558440 FAM212BQ9NTI7 297 aaPredicted RBP4.23□□□□□ -1.73
ZEB1-211ENST00000558440 TXNL4BQ9NX01 149 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms