RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 K7EM74 188 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 LST1O00453 97 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 COX7A2LO14548 114 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 OVOL1O14753 267 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 FSTL3O95633 263 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 LTAP01374 205 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 IFNA17P01571 189 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 TRGV3P03979 118 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 KDELR1P24390 212 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 S100A11P31949 105 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 OPRM1P35372 400 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 RPL35P42766 123 aaKnown RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 MAXP61244 160 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 RPS25P62851 125 aaKnown RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 FKBP1AP62942 108 aaKnown RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 PPP3R1P63098 170 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 HBA1P69905 142 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 ENDOGQ14249 297 aaKnown RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 FKBP1CQ5VVH2 108 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 WDR59Q6PJI9 974 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 HRCT1Q6UXD1 115 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF664Q8N3J9 261 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 OR52R1Q8NGF1 315 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 OR10D4PQ8NGN7 298 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 TMEM106AQ96A25 262 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 TOMM6Q96B49 74 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 BORCS8Q96FH0 119 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 CYYR1Q96J86 154 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 C2orf50Q96LR7 162 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 AP1S3Q96PC3 154 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 TRIB3Q96RU7 358 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 SLC25A21Q9BQT8 299 aaPredicted RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 PRADC1Q9BSG0 188 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 YIPF3Q9GZM5 350 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 GABARAPL1Q9H0R8 117 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 C11orf68Q9H3H3 251 aaKnown RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF586Q9NXT0 402 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 PCTPQ9UKL6 214 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 HS3ST2Q9Y278 367 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 NAIPQ13075 1403 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 TRIP11Q15643 1979 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 NUP210Q8TEM1 1887 aaPredicted RBP1.88□□□□□ -2.11
TRAV28-201ENST00000557548 DOCK6Q96HP0 2047 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 RALGAPBQ86X10 1494 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 NRXN1Q9ULB1 1477 aa1.88□□□□□ -2.11
TRAV28-201ENST00000557548 MYH7P12883 1935 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ADAMTS7Q9UKP4 1686 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 KIAA1671Q9BY89 1806 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 IGLV4-60A0A075B6I1 120 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 IGLV3-12A0A075B6K2 115 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 TRAV38-1A0A0B4J264 116 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 IGKV6D-41A0A0C4DH26 115 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 MEIS3P1A6NDR6 274 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 DISP2A7MBM2 1401 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 A8MUN3 132 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 LEUTXA8MZ59 168 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 C16orf90A8MZG2 172 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 CORTO00230 105 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 UBE2L6O14933 153 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 CD7P09564 240 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF705DP0CH99 300 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 CGB3P0DN86 165 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 CGB7P0DN87 165 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 PTHLHP12272 177 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SCN1AP35498 2009 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 LINC00313P59037 77 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 TAS2R20P59543 309 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 COPZ1P61923 177 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 RPS11P62280 158 aaKnown RBP eCLIP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 EIF3IQ13347 325 aaKnown RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 EIF4EBP1Q13541 118 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 RTL8BQ17RB0 113 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 VMA21Q3ZAQ7 101 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SCIMPQ6UWF3 145 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SPATA31E1Q6ZUB1 1445 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ADM2Q7Z4H4 148 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SH2D6Q7Z4S9 175 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 PRR15Q8IV56 129 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 IFT20Q8IY31 132 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 C8orf59Q8N0T1 100 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ANKRD31Q8N7Z5 1873 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 FER1L6-AS1Q8NA97 138 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 TERB2Q8NHR7 220 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 KLF14Q8TD94 323 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 LMX1AQ8TE12 382 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF721Q8TF20 911 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF418Q8TF45 676 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 RAB2BQ8WUD1 216 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 MAGOHBQ96A72 148 aaKnown RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 SLAMF6Q96DU3 332 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 RMI2Q96E14 147 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 WDR90Q96KV7 1748 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 LINC00167Q96N53 147 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ERMAPQ96PL5 475 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 PSMG3Q9BT73 122 aaPredicted RBP1.87□□□□□ -2.11
TRAV28-201ENST00000557548 RNF122Q9H9V4 155 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 OR5AC2Q9NZP5 309 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF492Q9P255 531 aa1.87□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF835Q9Y2P0 537 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms