RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-209ENST00000557342 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-209ENST00000557342 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
SLIRP-209ENST00000557342 PSG1P11464 419 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
SLIRP-209ENST00000557342 VAMP2P63027 116 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 THAP8Q8NA92 274 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 RABAC1Q9UI14 185 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 IGHV3-66A0A0C4DH42 116 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 DNASE2O00115 360 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-209ENST00000557342 DFFBO76075 338 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 PVALBP20472 110 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-209ENST00000557342 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-209ENST00000557342 P2RY1P47900 373 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 PAX9P55771 341 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 AKR1C1Q04828 323 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 HAGHQ16775 308 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
SLIRP-209ENST00000557342 OR10P1Q8NGE3 313 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 CHAC2Q8WUX2 184 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 RNF125Q96EQ8 232 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 SPATA25Q9BR10 227 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
SLIRP-209ENST00000557342 U3KQE9 123 aa9.32□□□□□ -0.92
SLIRP-209ENST00000557342 hCG_2014768A0A024R1R8 64 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 LOC102724200A0A096LPH7 203 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 RBMY1BA6NDE4 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 RBMY1EA6NEQ0 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 HELTA6NFD8 242 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 PMS2P5A8MQ11 134 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 FNDC10F2Z333 226 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 K7EPK0 472 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 RBMY1DP0C7P1 496 aaKnown RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 METTL15P1P0C7V9 234 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 TFPI2P48307 235 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 BCAP31P51572 246 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 AP2S1P53680 142 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 ZNF90Q03938 601 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 USF2Q15853 346 aaPredicted RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 OR8G2PQ6IF36 304 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 LILRB2Q8N423 598 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 GBGT1Q8N5D6 347 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 UBQLN2Q9UHD9 624 aa9.31□□□□□ -0.92
SLIRP-209ENST00000557342 LSM5Q9Y4Y9 91 aaKnown RBP9.31□□□□□ -0.92
SLIRP-209ENST00000557342 S100A7P31151 101 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 DLK1P80370 383 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 C16orf54Q6UWD8 224 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 RCHY1Q96PM5 261 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 GGACTQ9BVM4 153 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 GGTLC1Q9BX51 225 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 MGAT4CQ9UBM8 478 aa9.3□□□□□ -0.92
SLIRP-209ENST00000557342 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 SMCO3A2RU48 225 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 BUB3O43684 328 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 S100A10P60903 97 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 LYZP61626 148 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 RRAS2P62070 204 aaPredicted RBP9.29□□□□□ -0.92
SLIRP-209ENST00000557342 OR2F1Q13607 317 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 BPIFCQ8NFQ6 507 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
SLIRP-209ENST00000557342 GOSR2O14653 212 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 CCNKO75909 580 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 CAV2P51636 162 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 APOC4P55056 127 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 CYCSP99999 105 aaKnown RBP9.28□□□□□ -0.92
SLIRP-209ENST00000557342 IL15RAQ13261 267 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 RAB32Q13637 225 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 STXBP6Q8NFX7 210 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 PPP1R14BQ96C90 147 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 NMES1Q9C002 83 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 MED28Q9H204 178 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 SLC45A2Q9UMX9 530 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
SLIRP-209ENST00000557342 K7EQG2 157 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 SSNA1O43805 119 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 DEDDO75618 318 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 RLN2P04090 185 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 SELENOTP62341 195 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 TEPPQ6URK8 271 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 CYP2G1PQ6ZSU1 146 aa9.27□□□□□ -0.93
SLIRP-209ENST00000557342 C11orf1Q9H5F2 150 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms