RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 SRP19P09132 144 aaKnown RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 PAEPP09466 180 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 CD7P09564 240 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 CGB3P0DN86 165 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 CGB7P0DN87 165 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 CSRP1P21291 193 aaKnown RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BOP23527 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 S100A4P26447 101 aaKnown RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 ATP6V0CP27449 155 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BBP33778 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 SDC2P34741 201 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 OPRM1P35372 400 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 GNG4P50150 75 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BDP58876 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 LINC00313P59037 77 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BCP62807 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 SLC38A11Q08AI6 406 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 GRIN2AQ12879 1464 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 PDGFRLQ15198 375 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 MSMO1Q15800 293 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST2H2BEQ16778 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 ZNF181Q2M3W8 571 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 GLYATL3Q5SZD4 288 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 BCL2L15Q5TBC7 163 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 GTF2H5Q6ZYL4 71 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 MSRB3Q8IXL7 192 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 FER1L6-AS1Q8NA97 138 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 Q8NDZ9 215 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 OR4S1Q8NGB4 309 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 OR11G2Q8NGC1 345 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BHQ93079 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 ERMAPQ96PL5 475 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 MGLLQ99685 303 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BNQ99877 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 HIST1H2BMQ99879 126 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 AICDAQ9GZX7 198 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 CST9LQ9H4G1 147 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 OR5V1Q9UGF6 321 aa2.04□□□□□ -2.08
HIF1A-210ENST00000557206 SOX21Q9Y651 276 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-210ENST00000557206 PCNX2A6NKB5 2137 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 LTBP2Q14767 1821 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 HECW1Q76N89 1606 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 IGKV1D-37A0A075B6S9 117 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 ARRDC5A6NEK1 342 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 A8MUN3 132 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 SNAPC5O75971 98 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 NCR2O95944 276 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 TRGC2P03986 189 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 GPX1P07203 203 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 AKAIN1P0CW23 69 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 NFYBP25208 207 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 TAS2R45P59539 299 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 GLIPR1L1Q6UWM5 242 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 MARCH3Q86UD3 253 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 PRR15Q8IV56 129 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 C10orf126Q8N4M7 172 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-210ENST00000557206 SGMS2Q8NHU3 365 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 LMX1AQ8TE12 382 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 MAL2Q969L2 176 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 GPX7Q96SL4 187 aaPredicted RBP2.03□□□□□ -2.08
HIF1A-210ENST00000557206 TUBA4BQ9H853 241 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 RNF122Q9H9V4 155 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 TNFSF18Q9UNG2 199 aa2.03□□□□□ -2.08
HIF1A-210ENST00000557206 CCDC18Q5T9S5 1454 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 CLIP1P30622 1438 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 CEP162Q5TB80 1403 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 GGT3PA6NGU5 568 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 IFITM5A6NNB3 132 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 H7BYZ3 331 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 I3L521 148 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 J3QQQ9 107 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 NPFFO15130 113 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 CST7O76096 145 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 MT-ND4LP03901 98 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 P0DMU3 169 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 SRP14P37108 136 aaKnown RBP2.02□□□□□ -2.09
HIF1A-210ENST00000557206 DAPP51397 102 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 AKR1C2P52895 323 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 TMBIM6P55061 237 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
HIF1A-210ENST00000557206 YPEL3P61236 119 aaPredicted RBP2.02□□□□□ -2.09
HIF1A-210ENST00000557206 RRN3P1Q2M238 152 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 COL5A1-AS1Q5SY13 56 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 C1orf140Q5VVS0 124 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 NOXRED1Q6NXP6 359 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 RPL22L1Q6P5R6 122 aaKnown RBP2.02□□□□□ -2.09
HIF1A-210ENST00000557206 LCA10Q71F78 164 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 OR2T10Q8NGZ9 312 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 HIST1H2BAQ96A08 127 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 TEX37Q96LM6 180 aa2.02□□□□□ -2.09
HIF1A-210ENST00000557206 C1QTNF6Q9BXI9 259 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms