RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 CSMD1Q96PZ7 3565 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 IGHV3-72A0A0B4J1Y9 119 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 C22orf46C9J442 243 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 SLC25A17O43808 307 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 PCP4P48539 62 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 TMEM177Q53S58 311 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 IGFL2Q6UWQ7 119 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 OR4F17Q8NGA8 305 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 OR10X1Q8NGY0 326 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 MRPS16Q9Y3D3 137 aaKnown RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 CNOT1A5YKK6 2376 aaKnown RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 OR2J3O76001 311 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 MYCNOSP40205 109 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 TMEM200BQ69YZ2 307 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 OR4C13Q8NGP0 309 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 ZNF596Q8TC21 504 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 RNASE8Q8TDE3 154 aaKnown RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 GSX1Q9H4S2 264 aaPredicted RBP9.16□□□□□ -0.94
SRP54-213ENST00000556994 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
SRP54-213ENST00000556994 A0A1B0GXF2 115 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 A0A1W2PPI3 338 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 TOX4O94842 621 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 NBEAP1P0C6P0 100 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 FAM87AP0C7U9 286 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 TNFSF4P23510 183 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 ZNF138P52744 262 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 GAL3ST2Q9H3Q3 398 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 COX11Q9Y6N1 276 aa9.15□□□□□ -0.94
SRP54-213ENST00000556994 hDV102S1A0JD36 115 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 OR4C46A6NHA9 309 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 H0Y8G0 127 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 ENSAO43768 121 aaKnown RBP9.15□□□□□ -0.95
SRP54-213ENST00000556994 IGLV2-23P01705 113 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 HBBP68871 147 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 PRB3Q04118 309 aaPredicted RBP9.15□□□□□ -0.95
SRP54-213ENST00000556994 FAM120AOSQ5T036 256 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 TMEM167AQ8TBQ9 72 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 GPR82Q96P67 336 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.95
SRP54-213ENST00000556994 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.95
SRP54-213ENST00000556994 ATMQ13315 3056 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 TRAV8-1A0A0A6YYK1 113 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 CA7P43166 264 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 SUB1P53999 127 aaKnown RBP eCLIP9.14□□□□□ -0.95
SRP54-213ENST00000556994 DLX1P56177 255 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 TEX36Q5VZQ5 186 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 LYPD2Q6UXB3 125 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 THAP8Q8NA92 274 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 ZNF738Q8NE65 137 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 CHRDL1Q9BU40 450 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 RPP21Q9H633 154 aaKnown RBP9.14□□□□□ -0.95
SRP54-213ENST00000556994 ZNF835Q9Y2P0 537 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 PCNX1Q96RV3 2341 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 IGHV1-24A0A0C4DH33 117 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 P01737 135 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 CD40P25942 277 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 MUC15Q8N387 334 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 PERPQ96FX8 193 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 ASCL2Q99929 193 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 ASCL3Q9NQ33 180 aa9.14□□□□□ -0.95
SRP54-213ENST00000556994 SPAARA0A1B0GVQ0 90 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 NKX6-3A6NJ46 265 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 UBE2V1Q13404 147 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 MPV17L2Q567V2 206 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 ATP5L2Q7Z4Y8 100 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 A8MWL6 223 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 CNTFRP26992 372 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 VSTM2AQ8TAG5 236 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 CCL17Q92583 94 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
SRP54-213ENST00000556994 INS-IGF2F8WCM5 200 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 SYS1-DBNDD2H3BUS1 97 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 M0R296 226 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 CSN3P07498 182 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 MRGPRG-AS1Q2M3A8 158 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 CIARTQ8N365 385 aaPredicted RBP9.12□□□□□ -0.95
SRP54-213ENST00000556994 DAZAP1Q96EP5 407 aaKnown RBP9.12□□□□□ -0.95
SRP54-213ENST00000556994 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 Q9H3A6 140 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 WASHC3Q9Y3C0 194 aa9.12□□□□□ -0.95
SRP54-213ENST00000556994 LOC105371242A0A075B767 164 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 IGHV1-69-2A0A0G2JMI3 117 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 TOMM40O96008 361 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 TCRAP04437 139 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 TMEM30BQ3MIR4 351 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 DEFB124Q8NES8 71 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 C19orf71A6NCJ1 209 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 LTAP01374 205 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 MEF2CQ06413 473 aaPredicted RBP9.11□□□□□ -0.95
SRP54-213ENST00000556994 FBLN7Q53RD9 439 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms