RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TREML4Q6UXN2 200 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 YLPM1P49750 1951 aaKnown RBP14.09□□□□□ -0.15
PTPN21-208ENST00000556564 ZNF688P0C7X2 276 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 SPSB3Q6PJ21 355 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 VSIRQ9H7M9 311 aa14.08□□□□□ -0.15
PTPN21-208ENST00000556564 H0YIZ8 118 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 ATG101Q9BSB4 218 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 J3QLI3 93 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 HOXA3O43365 443 aaPredicted RBP14.08□□□□□ -0.16
PTPN21-208ENST00000556564 FAM110DQ8TAY7 271 aaPredicted RBP14.08□□□□□ -0.16
PTPN21-208ENST00000556564 EPDR1Q9UM22 224 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 POLEQ07864 2286 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 PMS2P5A8MQ11 134 aa14.08□□□□□ -0.16
PTPN21-208ENST00000556564 PPIFP30405 207 aaKnown RBP14.08□□□□□ -0.16
PTPN21-208ENST00000556564 SUPT4H1P63272 117 aaKnown RBP14.08□□□□□ -0.16
PTPN21-208ENST00000556564 SLC25A39Q9BZJ4 359 aaPredicted RBP14.08□□□□□ -0.16
PTPN21-208ENST00000556564 DIRC3C9JPN6 131 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 SPATA31B1PQ5VZV4 182 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 IFITM10A6NMD0 228 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 TEX36Q5VZQ5 186 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 GEMIN7Q9H840 131 aaKnown RBP14.07□□□□□ -0.16
PTPN21-208ENST00000556564 C17orf58Q2M2W7 97 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 CIARTQ8N365 385 aaPredicted RBP14.07□□□□□ -0.16
PTPN21-208ENST00000556564 IGLV3-9A0A075B6K5 115 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 TRGV4A0A0C4DH28 118 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 VENTXO95231 258 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 REC114Q7Z4M0 266 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 IFT22Q9H7X7 185 aa14.07□□□□□ -0.16
PTPN21-208ENST00000556564 C5orf52A6NGY3 159 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 TMEM250H0YL14 139 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 FAM120AOSQ5T036 256 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 KCNS1Q96KK3 526 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 HSPB9Q9BQS6 159 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 FABP5P3A8MUU1 101 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 SPRY4Q9C004 299 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 DKK4Q9UBT3 224 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 TRAV21A0A0B4J279 112 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 OVOL1O14753 267 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 DKK1O94907 266 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
PTPN21-208ENST00000556564 IGFL4Q6B9Z1 124 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 PSG8Q9UQ74 426 aa14.06□□□□□ -0.16
PTPN21-208ENST00000556564 LRTM2Q8N967 370 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 RNF166Q96A37 237 aaPredicted RBP14.05□□□□□ -0.16
PTPN21-208ENST00000556564 MGST2Q99735 147 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 PRORYQ9H606 182 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 HEATR5AQ86XA9 2040 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 CBLN1P23435 193 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 ZMAT5Q9UDW3 170 aaKnown RBP14.05□□□□□ -0.16
PTPN21-208ENST00000556564 ZNF256Q9Y2P7 627 aaPredicted RBP14.05□□□□□ -0.16
PTPN21-208ENST00000556564 EXOC3-AS1Q8N2X6 119 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 RNASE7Q9H1E1 156 aaKnown RBP14.05□□□□□ -0.16
PTPN21-208ENST00000556564 PAM16Q9Y3D7 125 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 ZNF318Q5VUA4 2279 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 FCN3O75636 299 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 TCF21O43680 179 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 FOSL1P15407 271 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 RSPO1Q2MKA7 263 aaPredicted RBP14.05□□□□□ -0.16
PTPN21-208ENST00000556564 ASCL2Q99929 193 aa14.05□□□□□ -0.16
PTPN21-208ENST00000556564 G3V318 75 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 OVOL3O00110 214 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 GCSHP23434 173 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 SPRNQ5BIV9 151 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 PRELID3AQ96N28 172 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 CMC4P56277 68 aaPredicted RBP14.04□□□□□ -0.16
PTPN21-208ENST00000556564 SUMO2P61956 95 aaKnown RBP14.04□□□□□ -0.16
PTPN21-208ENST00000556564 WDR83OSQ9Y284 106 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 KLF2Q9Y5W3 355 aaPredicted RBP14.04□□□□□ -0.16
PTPN21-208ENST00000556564 LEPROTL1O95214 131 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 GGTLC1Q9BX51 225 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 C7orf71A4D174 169 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 UBE2DNLQ8IWF7 75 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 PPP1R17O96001 155 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 LMO1P25800 156 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 MLANAQ16655 118 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 IL36BQ9NZH7 164 aa14.04□□□□□ -0.16
PTPN21-208ENST00000556564 IGKV1-6A0A0C4DH72 117 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 OR11H12B2RN74 326 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 IGHV2-5P01817 119 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 TDGF1P3P51864 188 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 RIPPLY3P57055 190 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 UBE2E2Q96LR5 201 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 TRGV9Q99603 122 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 SRP19P09132 144 aaKnown RBP14.03□□□□□ -0.16
PTPN21-208ENST00000556564 LGALS3P17931 250 aaKnown RBP14.03□□□□□ -0.16
PTPN21-208ENST00000556564 NMSQ5H8A3 153 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 IGHV4-30-2A0A087WSY4 118 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 A0A1B0GUT8 65 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 LINC01619G3V211 115 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 RNF151Q2KHN1 245 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 RHPN1-AS1Q9BWJ2 59 aa14.03□□□□□ -0.16
PTPN21-208ENST00000556564 ZFHX2Q9C0A1 2572 aaPredicted RBP14.03□□□□□ -0.16
PTPN21-208ENST00000556564 ZNF415Q09FC8 603 aa14.02□□□□□ -0.16
PTPN21-208ENST00000556564 MEIG1Q5JSS6 88 aa14.02□□□□□ -0.16
PTPN21-208ENST00000556564 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.16
PTPN21-208ENST00000556564 PRSS2P07478 247 aa14.02□□□□□ -0.17
PTPN21-208ENST00000556564 C18orf15Q96N68 181 aa14.02□□□□□ -0.17
PTPN21-208ENST00000556564 A0A0G2JRQ6 117 aa14.02□□□□□ -0.17
PTPN21-208ENST00000556564 ZNF833PQ6ZTB9 187 aa14.02□□□□□ -0.17
PTPN21-208ENST00000556564 OR10AG1Q8NH19 301 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms