RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SPRY2O43597 315 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 SCGB2A1O75556 95 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 CCNKO75909 580 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 BMI1P35226 326 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 APOC4P55056 127 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 PAFAH1B2P68402 229 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 OR2F1Q13607 317 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 C4orf46Q504U0 113 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 SPANXN5Q5MJ07 72 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 TMEM182Q6ZP80 229 aaPredicted RBP5.96□□□□□ -1.46
VTI1B-206ENST00000556461 COQ8AQ8NI60 647 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 DCANP1Q8TF63 244 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 SLC35E1Q96K37 410 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 C20orf85Q9H1P6 137 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 TMEM231Q9H6L2 316 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 TBC1D24Q9ULP9 559 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.46
VTI1B-206ENST00000556461 PIGBOS1A0A0B4J2F0 54 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 KIR2DL5BA0A0G2JN68 375 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 KIR2DL5BA0A0G2JPC4 375 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 ZFP92A6NM28 416 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 KNCNA6PVL3 124 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 PMS2P5A8MQ11 134 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 CCSO14618 274 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 BUB3O43684 328 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 SSSCA1O60232 199 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 MED6O75586 246 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 TCRBP04435 133 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 CD5P06127 495 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 GIG44P09565 113 aaPredicted RBP5.95□□□□□ -1.46
VTI1B-206ENST00000556461 ZNF688P0C7X2 276 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 GATA2P23769 480 aaPredicted RBP5.95□□□□□ -1.46
VTI1B-206ENST00000556461 PAX9P55771 341 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 ATP5IP56385 69 aaPredicted RBP5.95□□□□□ -1.46
VTI1B-206ENST00000556461 RAB11AP62491 216 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 Q6ZWC4 215 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 KIR2DL5AQ8N109 375 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 THAP8Q8NA92 274 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 ZBTB8BQ8NAP8 495 aaPredicted RBP5.95□□□□□ -1.46
VTI1B-206ENST00000556461 KIR2DL5BQ8NHK3 375 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 MITD1Q8WV92 249 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 RNF183Q96D59 192 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 RNF125Q96EQ8 232 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 SEC22CQ9BRL7 303 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 PBDC1Q9BVG4 233 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 CSTL1Q9H114 145 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 AGRNO00468 2067 aa5.95□□□□□ -1.46
VTI1B-206ENST00000556461 UBE2CO00762 179 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 SCGB1D2O95969 90 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 IFNA21P01568 189 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 NKX2-1P43699 371 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 EIF2B2P49770 351 aaKnown RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 CMC4P56277 68 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 DEFB1P60022 68 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 LYZP61626 148 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 IFITM3Q01628 133 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 IAH1Q2TAA2 248 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 ACOT7LQ6ZUV0 252 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 GRAMD2BQ96HH9 432 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 NARS2Q96I59 477 aaKnown RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 CIB3Q96Q77 187 aaPredicted RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 TRGV9Q99603 122 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 CCDC32Q9BV29 185 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 PSENENQ9NZ42 101 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 TP53TG1Q9Y2A0 90 aa5.94□□□□□ -1.46
VTI1B-206ENST00000556461 RCL1Q9Y2P8 373 aaKnown RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 STRAPQ9Y3F4 350 aaKnown RBP5.94□□□□□ -1.46
VTI1B-206ENST00000556461 HELTA6NFD8 242 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 CA1P00915 261 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-206ENST00000556461 MBPP02686 304 aaPredicted RBP5.93□□□□□ -1.46
VTI1B-206ENST00000556461 C4BPBP20851 252 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 RPP30P78346 268 aaKnown RBP5.93□□□□□ -1.46
VTI1B-206ENST00000556461 ARL16Q0P5N6 197 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 PSMG4Q5JS54 123 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 TMEM14EPQ6UXP3 125 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 SIGLEC15Q6ZMC9 328 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 TRPT1Q86TN4 253 aaKnown RBP5.93□□□□□ -1.46
VTI1B-206ENST00000556461 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 C17orf77Q96MU5 243 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 WDR12Q9GZL7 423 aaKnown RBP5.93□□□□□ -1.46
VTI1B-206ENST00000556461 NUDT15Q9NV35 164 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 GSKIPQ9P0R6 139 aa5.93□□□□□ -1.46
VTI1B-206ENST00000556461 SNRPGP15A8MWD9 76 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 H2AFB2P0C5Z0 115 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 METTL15P1P0C7V9 234 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 RRAS2P62070 204 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-206ENST00000556461 ACTL10Q5JWF8 245 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 OR8G2PQ6IF36 304 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 LINC00299Q6ZSB3 139 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 STHQ8IWL8 128 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 ZNF431Q8TF32 576 aaPredicted RBP5.92□□□□□ -1.46
VTI1B-206ENST00000556461 S100ZQ8WXG8 99 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 RAB40CQ96S21 281 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 NRN1Q9NPD7 142 aa5.92□□□□□ -1.46
VTI1B-206ENST00000556461 DNAH10Q8IVF4 4471 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 LCE6AA0A183 80 aa5.91□□□□□ -1.46
VTI1B-206ENST00000556461 FAM240BA0A1B0GVZ2 78 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms