RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF826PQ6ZT77 177 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 ODF3L1Q8IXM7 274 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 TVP23CQ96ET8 276 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 PARP12Q9H0J9 701 aaKnown RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 DUSP13Q9UII6 198 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FUT9Q9Y231 359 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 PKD1L2Q7Z442 2459 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FASNP49327 2511 aaKnown RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 DOCK11Q5JSL3 2073 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 SIRPB1O00241 398 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 WNT9BO14905 357 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 TESK1Q15569 626 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 OR10AG1Q8NH19 301 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FAM103A1Q9BTL3 118 aaKnown RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 IDI2-AS1Q9NZ38 188 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 FZR1Q9UM11 496 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 RNF115Q9Y4L5 304 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 ROS1P08922 2347 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 HCFC1P51610 2035 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 A0A0G2JRQ6 117 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 MT-ND6P03923 174 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 TFF1P04155 84 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 SLC25A6P12236 298 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 C22orf34Q6ZV56 151 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 Q8IYB0 196 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 OR10P1Q8NGE3 313 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 MRPL53Q96EL3 112 aaKnown RBP4.18□□□□□ -1.74
TMEM260-210ENST00000556422 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 NSG2Q9Y328 171 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 OR2W1Q9Y3N9 320 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 SLC25A15Q9Y619 301 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 TACC2O95359 2948 aa4.18□□□□□ -1.74
TMEM260-210ENST00000556422 IGF2RP11717 2491 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 K7EP34 96 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 TNFRSF13BO14836 293 aaPredicted RBP4.17□□□□□ -1.74
TMEM260-210ENST00000556422 NPFFO15130 113 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 PGLYRP1O75594 196 aaPredicted RBP4.17□□□□□ -1.74
TMEM260-210ENST00000556422 GRPP07492 148 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 IFITM1P13164 125 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 LMO1P25800 156 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 LPAR6P43657 344 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 PMVKQ15126 192 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 FAM53AQ6NSI3 398 aaPredicted RBP4.17□□□□□ -1.74
TMEM260-210ENST00000556422 ZNF295-AS1Q8N0V1 137 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 C8orf31Q8N9H6 132 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 UBALD1Q8TB05 177 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 SNRNP40Q96DI7 357 aaKnown RBP4.17□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 FBXL15Q9H469 300 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 RAXQ9Y2V3 346 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 SVEP1Q4LDE5 3571 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 MUC21A0A0G2JKD1 596 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 MUC21A0A140T8X8 626 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 C9JQL5 133 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 IGKV1-39P01597 117 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 IGKV1D-39P04432 117 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 CD40P25942 277 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 MUC21Q5SSG8 566 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 BAGE3Q86Y29 109 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 BAGE2Q86Y30 109 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 C1orf174Q8IYL3 243 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 DEFB125Q8N687 156 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 IL1F10Q8WWZ1 152 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 OR4C12Q96R67 309 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 TAAR3PQ9P1P4 343 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 A0A1W2PRD5 423 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 hADV38S2A0JD32 116 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 LRRC30A6NM36 301 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 G6PCP35575 357 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 GLIPR1P48060 266 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 RPL31P62899 125 aaKnown RBP4.17□□□□□ -1.74
TMEM260-210ENST00000556422 FOXC1Q12948 553 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 SPRNQ5BIV9 151 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 FAM231DQ6ZW35 169 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 SYT8Q8NBV8 401 aa4.17□□□□□ -1.74
TMEM260-210ENST00000556422 POLEQ07864 2286 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 A0A087WWC5 75 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 IGHV2-26A0A0B4J1V2 119 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 ZG16O60844 167 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 SNCGO76070 127 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 C8orf88P0DMB2 117 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 ACP7Q6ZNF0 438 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 TTC9CQ8N5M4 171 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 TMEM171Q8WVE6 324 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 A0A087X0K7 114 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 RHODO00212 210 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 PITX3O75364 302 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 JTBO76095 146 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 VDAC1P21796 283 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 EWSR1Q01844 656 aaKnown RBP eCLIP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 TBR1Q16650 682 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 MIDNQ504T8 468 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 COA6Q5JTJ3 125 aaKnown RBP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 Q6ZRM9 215 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 BORCS7Q96B45 105 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 WDR61Q9GZS3 305 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms