RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 MT3P25713 68 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 BRS3P32247 399 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 CFHR2P36980 270 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 IER3P46695 156 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 AMTP48728 403 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 KRTDAPP60985 99 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 NUTF2P61970 127 aaKnown RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 UBE2G1P62253 170 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 SELENOTP62341 195 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 GUSBP1Q15486 140 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 VMA21Q3ZAQ7 101 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 PRR30Q53SZ7 412 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 GCSAMLQ5JQS6 135 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 TIMM23BQ5SRD1 257 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 IBA57Q5T440 356 aaKnown RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 C1orf194Q5T5A4 169 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 C1orf185Q5T7R7 199 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ATP1A1-AS1Q5TC04 95 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ETFRF1Q6IPR1 90 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 Q6ZR03 302 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 C11orf53Q8IXP5 236 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 MMD2Q8IY49 270 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 VKORC1L1Q8N0U8 176 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 OR8I2Q8N0Y5 310 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 KLHDC1Q8N7A1 406 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 RBMXL3Q8N7X1 1067 aaKnown RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 FDCSPQ8NFU4 85 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 OR1L8Q8NGR8 309 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 OR5B3Q8NH48 314 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 OR4A5Q8NH83 315 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ITLN1Q8WWA0 313 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 HARBI1Q96MB7 349 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM68Q96MH6 324 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 NABP2Q9BQ15 211 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 HSPB9Q9BQS6 159 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 DERL1Q9BUN8 251 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 GNB1LQ9BYB4 327 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF430Q9H8G1 570 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF331Q9NQX6 463 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 OSTCQ9NRP0 149 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 PLSCR4Q9NRQ2 329 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 CBLN4Q9NTU7 201 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM14BQ9NUH8 114 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM106BQ9NUM4 274 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 NAT8BQ9UHF3 227 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 YTHDF2Q9Y5A9 579 aaKnown RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 COL6A5A8TX70 2615 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 IGKV1D-17A0A075B6S4 117 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 A0A1W2PRE2 83 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 C20orf202A1L168 122 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 HELTA6NFD8 242 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PGPEP1LA6NFU8 196 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 MBD3L5A6NJ08 208 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CORTO00230 105 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 SLC17A3O00476 420 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 UPK2O00526 184 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 SERF1AO75920 110 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CGAP01215 116 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 IGHV3-13P01766 116 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CRYABP02511 175 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 APCSP02743 223 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 SNRPCP09234 159 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 OR4A8P0C604 315 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 OR10J4P0C629 311 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 C8orf88P0DMB2 117 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CT45A6P0DMU7 189 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CT45A5P0DMU8 189 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CT45A7P0DMV0 189 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 HIST1H1EP10412 219 aaKnown RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PAX1P15863 534 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PMCHP20382 165 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 USF1P22415 310 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 NPPCP23582 126 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 GLRXP35754 106 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 Q0VG73 95 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 BATFQ16520 125 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 POU2AF1Q16633 256 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 DEFB109BQ30KR1 87 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CT45A1Q5HYN5 189 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 OR10J3Q5JRS4 329 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 STUMQ69YW2 141 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 FAM53AQ6NSI3 398 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 FAM71F2Q6NXP2 309 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 RASL11AQ6T310 242 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 TCF23Q7RTU1 214 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 LRP11Q86VZ4 500 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PDPNQ86YL7 162 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 TGIF2LXQ8IUE1 241 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 ABHD12Q8N2K0 398 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF664Q8N3J9 261 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PNKDQ8N490 385 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 ZNRF1Q8ND25 227 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 STXBP6Q8NFX7 210 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 OR10X1Q8NGY0 326 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 CT45A3Q8NHU0 189 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 MBD3L2Q8NHZ7 208 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-241ENST00000556374 NEUROG1Q92886 237 aa3.55□□□□□ -1.84
ATXN3-241ENST00000556374 PERPQ96FX8 193 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms