RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 C5orf51A6NDU8 294 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 BMPR1BO00238 502 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 WRBO00258 174 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 PLA2G10O15496 165 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 NUPL2O15504 423 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 NDUFB6O95139 128 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 MT-CO2P00403 227 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 TCRBP04435 133 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 IFNA4P05014 189 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 OR4E1P0C645 316 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 IAPPP10997 89 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 GP9P14770 177 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 OPRK1P41145 380 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 INSL3P51460 131 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 UBE2MP61081 183 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 SUPT4H1P63272 117 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 SRPXP78539 464 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 ANKRD55Q3KP44 614 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 RBPMS2Q6ZRY4 209 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 FAM219AQ8IW50 185 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 OR1P1Q8NH06 330 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 COQ8AQ8NI60 647 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 ENKURQ8TC29 256 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 ASCL2Q99929 193 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 C7orf50Q9BRJ6 194 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 SRSF8Q9BRL6 282 aaKnown RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 TUBA4BQ9H853 241 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 SLC2A8Q9NY64 477 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 C21orf62Q9NYP8 219 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 ZNF256Q9Y2P7 627 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-238ENST00000556288 TMEM56-RWDD3S4R434 201 aa3.53□□□□□ -1.84
ATXN3-238ENST00000556288 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 PIGBOS1A0A0B4J2F0 54 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 A0A1B0GU03 582 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 IZUMO1RA6ND01 250 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 USP17L23D6RBM5 183 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 K7EIL1 84 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 TGOLN2O43493 480 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 MED6O75586 246 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 ADAP1O75689 374 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 BRI3O95415 125 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 CSN3P07498 182 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 RNASE2P10153 161 aaKnown RBP3.52□□□□□ -1.85
ATXN3-238ENST00000556288 FOLR2P14207 255 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 CBLN1P23435 193 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 HTR2BP41595 481 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 NPBWR1P48145 328 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 TFPI2P48307 235 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 RAB11AP62491 216 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 SPANXN5Q5MJ07 72 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 GGNBP1Q5YKI7 109 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 LYG2Q86SG7 212 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 GTSCR1Q86UQ5 136 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 DTD1Q8TEA8 209 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 IL22RA2Q969J5 263 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 GALNT14Q96FL9 552 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 CHRDL1Q9BU40 450 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 UFC1Q9Y3C8 167 aa3.52□□□□□ -1.85
ATXN3-238ENST00000556288 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TRAV14DV4A0A0A6YYC5 116 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SMCO3A2RU48 225 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 C2orf70A6NJV1 201 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 I3L2K1 104 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 K7EIM0 57 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 L7N2F9 121 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 CORTO00230 105 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 CCSO14618 274 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SYNGR2O43760 224 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 CCNKO75909 580 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TMEM50AO95807 157 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 CTSGP08311 255 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 NPY1RP25929 384 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 RELQ04864 619 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TNFRSF9Q07011 255 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 DHRS2Q13268 280 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 ASAH1Q13510 395 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 TIGITQ495A1 244 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-238ENST00000556288 LAMTOR1Q6IAA8 161 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 ETFRF1Q6IPR1 90 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
ATXN3-238ENST00000556288 SPSB3Q6PJ21 355 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms