RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 CEACAM4O75871 244 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 LHBP01229 141 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 LIPFP07098 398 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 FCGR2BP31994 310 aaPredicted RBP12.06□□□□□ -0.48
NEK9-209ENST00000556170 ADMP35318 185 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 NUP37Q8NFH4 326 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 USP9YO00507 2555 aaPredicted RBP12.06□□□□□ -0.48
NEK9-209ENST00000556170 IGHV3OR16-10A0A075B7F0 116 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 LCN2P80188 198 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 SPATA45Q537H7 98 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 APCSP02743 223 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 ZNF672Q499Z4 452 aaPredicted RBP12.05□□□□□ -0.48
NEK9-209ENST00000556170 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 ZFYVE26Q68DK2 2539 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
NEK9-209ENST00000556170 PRSS8Q16651 343 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 WDR73Q6P4I2 378 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 VKORC1Q9BQB6 163 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 PTPN13Q12923 2485 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 DYSFO75923 2080 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 FOXA3P55318 350 aaPredicted RBP12.05□□□□□ -0.48
NEK9-209ENST00000556170 KLRD1Q13241 179 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 LDLRAD2Q5SZI1 272 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
NEK9-209ENST00000556170 IGHV2-26A0A0B4J1V2 119 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 TIMM23O14925 209 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 STXBP6Q8NFX7 210 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
NEK9-209ENST00000556170 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 ZNF785A8K8V0 405 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 IL4P05112 153 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 WT1-ASQ06250 92 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 FAM19A2Q8N3H0 131 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 PGLYRP4Q96LB8 373 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 WNT10AQ9GZT5 417 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 MYO18BQ8IUG5 2567 aa12.04□□□□□ -0.48
NEK9-209ENST00000556170 THBDP07204 575 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 HIST1H1EP10412 219 aaKnown RBP12.03□□□□□ -0.48
NEK9-209ENST00000556170 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 SERF1AO75920 110 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 PCSK5Q92824 1860 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 DMDP11532 3685 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 IGKV3-7A0A075B6H7 116 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 LOXP28300 417 aaPredicted RBP12.03□□□□□ -0.48
NEK9-209ENST00000556170 CHRDL1Q9BU40 450 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
NEK9-209ENST00000556170 UQCR10Q9UDW1 63 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 A0A1W2PPI3 338 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 PEX7O00628 323 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 TMEM177Q53S58 311 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 ASCL2Q99929 193 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
NEK9-209ENST00000556170 ZNF292O60281 2723 aa12.02□□□□□ -0.48
NEK9-209ENST00000556170 DSCAMO60469 2012 aa12.02□□□□□ -0.48
NEK9-209ENST00000556170 C19orf24Q9BVV8 132 aa12.02□□□□□ -0.48
NEK9-209ENST00000556170 TLN2Q9Y4G6 2542 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 BRS3P32247 399 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 SSBP2P81877 361 aaPredicted RBP12.02□□□□□ -0.49
NEK9-209ENST00000556170 MUC21Q5SSG8 566 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 TCRBV4S1A1TA0A5B7 111 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 P0C879 139 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 KLRB1Q12918 225 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
NEK9-209ENST00000556170 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.49
NEK9-209ENST00000556170 RNASEH2CQ8TDP1 164 aaKnown RBP12.02□□□□□ -0.49
NEK9-209ENST00000556170 MRPL32Q9BYC8 188 aaKnown RBP12.02□□□□□ -0.49
NEK9-209ENST00000556170 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 M0R2Z0 102 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 CD99P14209 185 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 E7EUB6 86 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 RIPPLY3P57055 190 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 THYN1Q9P016 225 aa12.01□□□□□ -0.49
NEK9-209ENST00000556170 MYO9AB2RTY4 2548 aa12□□□□□ -0.49
NEK9-209ENST00000556170 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
NEK9-209ENST00000556170 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
NEK9-209ENST00000556170 ATP5IP56385 69 aaPredicted RBP12□□□□□ -0.49
NEK9-209ENST00000556170 TCF24Q7RTU0 167 aa12□□□□□ -0.49
NEK9-209ENST00000556170 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
NEK9-209ENST00000556170 RITA1Q96K30 269 aa12□□□□□ -0.49
NEK9-209ENST00000556170 ZFP30Q9Y2G7 519 aa12□□□□□ -0.49
NEK9-209ENST00000556170 TRAV8-1A0A0A6YYK1 113 aa12□□□□□ -0.49
NEK9-209ENST00000556170 CGB1A6NKQ9 187 aa12□□□□□ -0.49
NEK9-209ENST00000556170 J3KRW8 73 aa12□□□□□ -0.49
NEK9-209ENST00000556170 ISLRO14498 428 aa12□□□□□ -0.49
NEK9-209ENST00000556170 OR2J3O76001 311 aa12□□□□□ -0.49
NEK9-209ENST00000556170 UCNP55089 124 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms