RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 VPS13DQ5THJ4 4388 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 IGHV4-4A0A075B6R2 117 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 TRAV10A0A0B4J240 114 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 IGHV7-4-1A0A0J9YVY3 117 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 hDV102S1A0JD36 115 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 K7EMT4 169 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 M0R2N4 97 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SULT1C2O00338 296 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 UPK2O00526 184 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 PDCD5O14737 125 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 YIF1AO95070 293 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 TMEM50AO95807 157 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 OR13C7P0DN81 318 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 LINC00310P59036 64 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 TAS2R31P59538 309 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 CDNFQ49AH0 187 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 CNIH2Q6PI25 160 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 NR2C2APQ86WQ0 139 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SPAG16Q8N0X2 631 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 Q8NAQ8 132 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 NUDCD2Q8WVJ2 157 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SECTM1Q8WVN6 248 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 RHPN1-AS1Q9BWJ2 59 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 HINT2Q9BX68 163 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 CCL28Q9NRJ3 127 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SCN3BQ9NY72 215 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 SMPXQ9UHP9 88 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 FLVCR2Q9UPI3 526 aa4.23□□□□□ -1.73
PRKCH-220ENST00000556164 PUS1Q9Y606 427 aaKnown RBP eCLIP4.23□□□□□ -1.73
PRKCH-220ENST00000556164 TMEM235A6NFC5 223 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 IFITM5A6NNB3 132 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 C15orf61A6NNL5 157 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 RTL8CO15255 209 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
PRKCH-220ENST00000556164 HPRT1P00492 218 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 EIF4EP06730 217 aaKnown RBP4.22□□□□□ -1.73
PRKCH-220ENST00000556164 TRAPPC2P0DI81 140 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 TRAPPC2BP0DI82 140 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 NQO2P16083 231 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 MYL9P24844 172 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 GNG2P59768 71 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 PAFAH1B2P68402 229 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 WT1-ASQ06250 92 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 MLLT11Q13015 90 aaPredicted RBP4.22□□□□□ -1.73
PRKCH-220ENST00000556164 CATR1Q13166 79 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 POU2AF1Q16633 256 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 HACD4Q5VWC8 232 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 PVRIGQ6DKI7 326 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 STEAP1BQ6NZ63 245 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 Q6ZTC4 211 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 TCF24Q7RTU0 167 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 OR51H1Q8NH63 302 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 NIPSNAP3BQ9BS92 247 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 CCDC90BQ9GZT6 254 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 DCSTAMPQ9H295 470 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 ACOT13Q9NPJ3 140 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 BATF3Q9NR55 127 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 ANXA10Q9UJ72 324 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 F11RQ9Y624 299 aaKnown RBP4.22□□□□□ -1.73
PRKCH-220ENST00000556164 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
PRKCH-220ENST00000556164 TRAV14DV4A0A0A6YYC5 116 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 TRAV1-2A0A0B4J238 106 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 TEX50A0A1B0GTY4 177 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RAB19A4D1S5 217 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 TEX46H3BTG2 121 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 K7EIM0 57 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 DNASE2O00115 360 aaPredicted RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RBFOX2O43251 390 aaKnown RBP eCLIP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 SNAPINO95295 136 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 PPYP01298 95 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 CTSGP08311 255 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RBMY1A1P0DJD3 496 aaKnown RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RBMY1CP0DJD4 496 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 P0DMU3 169 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 FAM231AP0DMU4 169 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 FAM231CP0DMU5 169 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 PTHLHP12272 177 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 MIFP14174 115 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RAB3BP20337 219 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RAB4AP20338 218 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 FCGR2CP31995 323 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 FXYD4P59646 89 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 DEFB131AP59861 70 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 HERV-K104P61576 105 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 ERVK-16P61578 105 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RBMY1FQ15415 496 aaKnown RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 MSMO1Q15800 293 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 AADACL3Q5VUY0 350 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 UQCC3Q6UW78 93 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 HSD17B13Q7Z5P4 300 aaPredicted RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 POM121L12Q8N7R1 296 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms