RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SMCO1Q147U7 214 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 RBMY1FQ15415 496 aaKnown RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 C1orf194Q5T5A4 169 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 SAMD13Q5VXD3 122 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 SPATA31B1PQ5VZV4 182 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 CLVS1Q8IUQ0 354 aaPredicted RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 LGI3Q8N145 548 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 OR51S1Q8NGJ8 323 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 TMEM170AQ8WVE7 144 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 RNF126Q9BV68 326 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 CCDC59Q9P031 241 aaKnown RBP5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 TBC1D24Q9ULP9 559 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 X6R8D5 127 aa5.64□□□□□ -1.51
PTCSC3-201ENST00000556013 IGHV4-28A0A0C4DH34 117 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 TMEM189A5PLL7 270 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 SNRPGP15A8MWD9 76 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 IGLL5B9A064 214 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 FAM90A26D6RGX4 464 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 H3BMM0 161 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 NXPH3O95157 252 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 IFNA10P01566 189 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 HLA-DMBP28068 263 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 S100A7P31151 101 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 FAUP35544 74 aaKnown RBP5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 ID1P41134 155 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 USF2Q15853 346 aaPredicted RBP5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 TMEM128Q5BJH2 165 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 ACTL10Q5JWF8 245 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 SIGLEC15Q6ZMC9 328 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 RPP25LQ8N5L8 163 aaKnown RBP5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 LRTM2Q8N967 370 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 DYNC2LI1Q8TCX1 351 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 DTD1Q8TEA8 209 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 RNF125Q96EQ8 232 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 FAM210BQ96KR6 192 aa5.63□□□□□ -1.51
PTCSC3-201ENST00000556013 ELOA3CA0A087WX78 387 aaPredicted RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 TEX48A0A1B0GUV7 120 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 FABP12A6NFH5 140 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 PITX3O75364 302 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 MED6O75586 246 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 DEDDO75618 318 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 HLA-DRB4P13762 266 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 AKR1C4P17516 323 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 C4BPBP20851 252 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 TNFSF8P32971 234 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 AP3S2P59780 193 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 RAB11AP62491 216 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 SUPT4H1P63272 117 aaKnown RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 RPP30P78346 268 aaKnown RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 GAMTQ14353 236 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 SPCS2Q15005 226 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 PSMG4Q5JS54 123 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 GGNBP1Q5YKI7 109 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF705AQ6ZN79 300 aaPredicted RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 LINC00336Q6ZUF6 198 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 LYZL2Q7Z4W2 148 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 CIB3Q96Q77 187 aaPredicted RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 SLC25A21Q9BQT8 299 aaPredicted RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 SLIRPQ9GZT3 109 aaKnown RBP5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 SLC45A2Q9UMX9 530 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 TMED3Q9Y3Q3 217 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 HLA-DRB4X5D2U9 266 aa5.62□□□□□ -1.51
PTCSC3-201ENST00000556013 ZFP92A6NM28 416 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 DEFB4AO15263 64 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 P0DMU3 169 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 FAM231AP0DMU4 169 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 FAM231CP0DMU5 169 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 MEOX2P50222 304 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 PAX9P55771 341 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 OXA1LQ15070 435 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 C12orf74Q32Q52 190 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 FOXI2Q6ZQN5 318 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 OR4D5Q8NGN0 318 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 ACY3Q96HD9 319 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 SLC35E1Q96K37 410 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 TRGV9Q99603 122 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 RBKSQ9H477 322 aa5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 SAV1Q9H4B6 383 aaPredicted RBP5.61□□□□□ -1.51
PTCSC3-201ENST00000556013 IGHV4-4A0A075B6R2 117 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 IGKV1D-37A0A075B6S9 117 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 DEFB131BA0A096LNP1 70 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF705FA8MVS1 300 aaPredicted RBP5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 ISLRO14498 428 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 AMBPP02760 352 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF705DP0CH99 300 aaPredicted RBP5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF705BP0CI00 300 aaPredicted RBP5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PSMB3P49720 205 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PRR20EP86478 221 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PRR20CP86479 221 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PRR20DP86480 221 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PRR20BP86481 221 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 PRR20AP86496 221 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 Q6ZTC4 211 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 THAP8Q8NA92 274 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 OR1S1Q8NH92 325 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 GPR82Q96P67 336 aa5.6□□□□□ -1.51
PTCSC3-201ENST00000556013 MCUBQ9NWR8 336 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms