RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 RND3P61587 244 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 FCN2Q15485 313 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 COQ8AQ8NI60 647 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 SCPEP1Q9HB40 452 aa13.25□□□□□ -0.29
SUPT16H-203ENST00000555752 F5H768 121 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 INAFM2P0DMQ5 153 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 ELK1P19419 428 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 PSMB3P49720 205 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 CCL18P55774 89 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 SPCS3P61009 180 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 PBDC1Q9BVG4 233 aa13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
SUPT16H-203ENST00000555752 ID1P41134 155 aa13.23□□□□□ -0.29
SUPT16H-203ENST00000555752 C2orf83Q53S99 150 aa13.23□□□□□ -0.29
SUPT16H-203ENST00000555752 SNX29P2Q8IUI4 249 aa13.23□□□□□ -0.29
SUPT16H-203ENST00000555752 RNASE11Q8TAA1 199 aaKnown RBP13.23□□□□□ -0.29
SUPT16H-203ENST00000555752 TMEM208Q9BTX3 173 aa13.23□□□□□ -0.29
SUPT16H-203ENST00000555752 A0A0J9YX75 114 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RCVRNP35243 200 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RPS19P39019 145 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 ALDH3B2P48448 385 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 PAX9P55771 341 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 DLK1P80370 383 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RNASEH2CQ8TDP1 164 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 RRNAD1Q96FB5 475 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 C20orf173Q96LM9 149 aa13.22□□□□□ -0.29
SUPT16H-203ENST00000555752 TMEM127O75204 238 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 ATG12O94817 140 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 FUSP35637 526 aaKnown RBP eCLIP13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 AARDQ4LEZ3 155 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 EBLN2Q6P2I7 272 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 Q9H8V8 135 aa13.21□□□□□ -0.29
SUPT16H-203ENST00000555752 AZU1P20160 251 aa13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 UCP1P25874 307 aa13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 LHFPL1Q86WI0 220 aa13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 ZNF486Q96H40 463 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 IGF2BP2-AS1Q96M15 143 aa13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 UHRF2Q96PU4 802 aa13.2□□□□□ -0.3
SUPT16H-203ENST00000555752 MYCBP2O75592 4640 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 LYRM9A8MSI8 78 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 M0R2Z0 102 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 ZNF90Q03938 601 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 NEDD8Q15843 81 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 DOK5Q9P104 306 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 RAB26Q9ULW5 256 aa13.19□□□□□ -0.3
SUPT16H-203ENST00000555752 CEBPZOSA8MTT3 80 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 CRXO43186 299 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 CLINT1Q14677 625 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 MEF2DQ14814 521 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 CROCCP3Q8IVE0 287 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
SUPT16H-203ENST00000555752 A8MTW9 85 aa13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 ISLRO14498 428 aa13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 ATP5G1P05496 136 aa13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 ATP5G3P48201 142 aa13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 LSM3P62310 102 aaKnown RBP13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 SUPT4H1P63272 117 aaKnown RBP13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 OR8G2PQ6IF36 304 aa13.17□□□□□ -0.3
SUPT16H-203ENST00000555752 IGKV1D-37A0A075B6S9 117 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 NUP62P37198 522 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 LYZP61626 148 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 BAP18Q8IXM2 172 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 OR4C16Q8NGL9 310 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 C17orf77Q96MU5 243 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 ABHD1Q96SE0 405 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 COMMD3Q9UBI1 195 aa13.16□□□□□ -0.3
SUPT16H-203ENST00000555752 CD3DP04234 171 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 OR5AC1P0C628 307 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 XGP55808 180 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 KLF9Q13886 244 aaPredicted RBP13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 RNASE10Q5GAN6 216 aaKnown RBP13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 OR11H7Q8NGC8 314 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 OR4D10Q8NGI6 311 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 C16orf92Q96LL3 132 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 Q9H3A6 140 aa13.15□□□□□ -0.3
SUPT16H-203ENST00000555752 TRAV12-2A0A075B6T6 113 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms