RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PFDN2Q9UHV9 154 aa7.93□□□□□ -1.14
NEK9-205ENST00000555405 SLC45A2Q9UMX9 530 aa7.93□□□□□ -1.14
NEK9-205ENST00000555405 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
NEK9-205ENST00000555405 IGKV1D-37A0A075B6S9 117 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 INS-IGF2F8WCM5 200 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 LINC01006Q8NI28 216 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 BLNKQ8WV28 456 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 DPF1Q92782 380 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 RCC1LQ96I51 464 aaKnown RBP7.92□□□□□ -1.14
NEK9-205ENST00000555405 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
NEK9-205ENST00000555405 ARV1Q9H2C2 271 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 TREM1Q9NP99 234 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 RNF114Q9Y508 228 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 MAP1LC3B2A6NCE7 125 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 TMEM41BQ5BJD5 291 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 SSX7Q7RTT5 188 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 ZNF114Q8NC26 417 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 TMEM116Q8NCL8 245 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 PHYHIPLQ96FC7 376 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 TMEM68Q96MH6 324 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 MAP1LC3BQ9GZQ8 125 aa7.92□□□□□ -1.14
NEK9-205ENST00000555405 MPDU1O75352 247 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 HYPMO75409 117 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 BLOC1S1P78537 153 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 C10orf113Q5VZT2 155 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 COMMD7Q86VX2 200 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 DNAJC4Q9NNZ3 241 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 LSM4Q9Y4Z0 139 aaKnown RBP7.91□□□□□ -1.14
NEK9-205ENST00000555405 CTSGP08311 255 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 ADMP35318 185 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 SERF2P84101 59 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 LINC00305Q7Z4B0 112 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 KLHL30-AS1Q8NEE0 82 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 CCDC140Q96MF4 163 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 PRDM13Q9H4Q3 707 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 A0A0G2JLM5 398 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 SCGB2A1O75556 95 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 SCAF4O95104 1147 aaKnown RBP7.91□□□□□ -1.14
NEK9-205ENST00000555405 CD28P10747 220 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 RPL15P61313 204 aaKnown RBP7.91□□□□□ -1.14
NEK9-205ENST00000555405 TOR2AQ5JU69 321 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 GATAD1Q8WUU5 269 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
NEK9-205ENST00000555405 UMAD1C9J7I0 102 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 RNASE1P07998 156 aaKnown RBP7.9□□□□□ -1.14
NEK9-205ENST00000555405 RPL29P47914 159 aaKnown RBP7.9□□□□□ -1.14
NEK9-205ENST00000555405 RPEL1Q2QD12 228 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 VWC2Q2TAL6 325 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 TMEM86BQ8N661 226 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 ZNF502Q8TBZ5 544 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 PYYP10082 97 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 ZNF726P1Q15940 193 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 PSMG3Q9BT73 122 aaPredicted RBP7.9□□□□□ -1.14
NEK9-205ENST00000555405 SCRT1Q9BWW7 348 aa7.9□□□□□ -1.14
NEK9-205ENST00000555405 TGOLN2O43493 480 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 MBP02144 154 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 SELENOTP62341 195 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 RHOBP62745 196 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 C8orf86Q6ZUL3 223 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 RXFP4Q8TDU9 374 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 RNF125Q96EQ8 232 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 KCNIP2Q9NS61 270 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 TMEM160Q9NX00 188 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 HIGD1AQ9Y241 93 aa7.9□□□□□ -1.15
NEK9-205ENST00000555405 RGS13O14921 159 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 IGHG4P01861 327 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 ARL14EPLP0DKL9 152 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 TOMM20LQ6UXN7 152 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 TRGV9Q99603 122 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 CITED2Q99967 270 aaPredicted RBP7.89□□□□□ -1.15
NEK9-205ENST00000555405 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 TRBV9A0A0B4J1U6 114 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
NEK9-205ENST00000555405 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 FABP1P07148 127 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 SYNJ2BPP57105 145 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 USF2Q15853 346 aaPredicted RBP7.89□□□□□ -1.15
NEK9-205ENST00000555405 CLLU1Q5K131 121 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 PATE2Q6UY27 113 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 IL34Q6ZMJ4 242 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 WFDC3Q8IUB2 231 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
NEK9-205ENST00000555405 LRRC20Q8TCA0 184 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 RARRES2Q99969 163 aa7.89□□□□□ -1.15
NEK9-205ENST00000555405 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 TRBV7-1A0A0A6YYK4 115 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 TFPI2P48307 235 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 OR11H1Q8NG94 326 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 OR4F5Q8NH21 305 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 VN1R17PQ8TDU5 208 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PEF1Q9UBV8 284 aaKnown RBP7.88□□□□□ -1.15
NEK9-205ENST00000555405 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 I3L521 148 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 PSMB8P28062 276 aa7.88□□□□□ -1.15
NEK9-205ENST00000555405 SRSF3P84103 164 aaKnown RBP7.88□□□□□ -1.15
NEK9-205ENST00000555405 PRR20EP86478 221 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms